RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.75□□□□□ -1.49
UBR1-205ENST00000564540 MIS18BP1Q6P0N0 1132 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 IQCDQ96DY2 449 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 SELENOOQ9BVL4 669 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 GJB4Q9NTQ9 266 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 STEAP1Q9UHE8 339 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 BTBD3Q9Y2F9 522 aa5.75□□□□□ -1.49
UBR1-205ENST00000564540 POM121BA6NF01 834 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 BTBD19C9JJ37 291 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 TMEM232C9JQI7 657 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 THAP12O43422 761 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 CA12O43570 354 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 CD19P15391 556 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 PHKG2P15735 406 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 HTR7P34969 479 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 COPAP53621 1224 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 FHL3Q13643 280 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 LARS2Q15031 903 aaKnown RBP5.74□□□□□ -1.49
UBR1-205ENST00000564540 DAZAP2Q15038 168 aaPredicted RBP5.74□□□□□ -1.49
UBR1-205ENST00000564540 DENND2CQ68D51 928 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 MZT2AQ6P582 158 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 TMEM65Q6PI78 240 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 DCDC5Q6ZRR9 648 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 CCDC33Q8N5R6 958 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 LRRC46Q96FV0 321 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 HS6ST2Q96MM7 605 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 PRSS22Q9GZN4 317 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 SLC25A32Q9H2D1 315 aa5.74□□□□□ -1.49
UBR1-205ENST00000564540 HEYLQ9NQ87 328 aaPredicted RBP5.74□□□□□ -1.49
UBR1-205ENST00000564540 A8MVJ9 347 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 FOXN3O00409 490 aaPredicted RBP5.73□□□□□ -1.49
UBR1-205ENST00000564540 APAF1O14727 1248 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 TSHRP16473 764 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 ATF7P17544 494 aaPredicted RBP5.73□□□□□ -1.49
UBR1-205ENST00000564540 PRIM2P49643 509 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 CASP5P51878 434 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 EIF4A1P60842 406 aaKnown RBP5.73□□□□□ -1.49
UBR1-205ENST00000564540 ZNF268Q14587 947 aaPredicted RBP5.73□□□□□ -1.49
UBR1-205ENST00000564540 SEC23BQ15437 767 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 GRHL2Q6ISB3 625 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 FSTL5Q8N475 847 aaPredicted RBP5.73□□□□□ -1.49
UBR1-205ENST00000564540 RNF152Q8N8N0 203 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 ATP11CQ8NB49 1132 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 PNISRQ8TF01 805 aaKnown RBP5.73□□□□□ -1.49
UBR1-205ENST00000564540 SCARB1Q8WTV0 552 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 EDC3Q96F86 508 aaKnown RBP5.73□□□□□ -1.49
UBR1-205ENST00000564540 ZDHHC12Q96GR4 267 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 C8orf48Q96LL4 319 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 FAM227BQ96M60 508 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 SARGQ9BW04 601 aa5.73□□□□□ -1.49
UBR1-205ENST00000564540 SCAF8Q9UPN6 1271 aaKnown RBP5.73□□□□□ -1.49
UBR1-205ENST00000564540 CYP2D7A0A087X1C5 515 aa5.72□□□□□ -1.49
UBR1-205ENST00000564540 BCAR3O75815 825 aa5.72□□□□□ -1.49
UBR1-205ENST00000564540 ADRA1DP25100 572 aa5.72□□□□□ -1.49
UBR1-205ENST00000564540 ATICP31939 592 aa5.72□□□□□ -1.49
UBR1-205ENST00000564540 CFHR3Q02985 330 aa5.72□□□□□ -1.49
UBR1-205ENST00000564540 KCNB1Q14721 858 aa5.72□□□□□ -1.49
UBR1-205ENST00000564540 ST3GAL2Q16842 350 aa5.72□□□□□ -1.49
UBR1-205ENST00000564540 CRTC1Q6UUV9 634 aa5.72□□□□□ -1.49
UBR1-205ENST00000564540 ZNF813Q6ZN06 617 aa5.72□□□□□ -1.49
UBR1-205ENST00000564540 PNPLA1Q8N8W4 532 aa5.72□□□□□ -1.49
UBR1-205ENST00000564540 MBD3L2Q8NHZ7 208 aaPredicted RBP5.72□□□□□ -1.49
UBR1-205ENST00000564540 RPL36ALQ969Q0 106 aaKnown RBP5.72□□□□□ -1.49
UBR1-205ENST00000564540 PRR11Q96HE9 360 aaPredicted RBP5.72□□□□□ -1.49
UBR1-205ENST00000564540 ZC3H10Q96K80 434 aaKnown RBP5.72□□□□□ -1.49
UBR1-205ENST00000564540 TBCBQ99426 244 aa5.72□□□□□ -1.49
UBR1-205ENST00000564540 USP29Q9HBJ7 922 aa5.72□□□□□ -1.49
UBR1-205ENST00000564540 COL15A1P39059 1388 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 H3BNC9 293 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 CLIC1O00299 241 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 FCHO1O14526 889 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 PMM2O15305 246 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 PRAMEF2O60811 474 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 TOP3BO95985 862 aaKnown RBP5.71□□□□□ -1.5
UBR1-205ENST00000564540 TMEM225BP0DP42 221 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 ARP10275 920 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 FGFR2P21802 821 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 ATP5F1P24539 256 aaPredicted RBP5.71□□□□□ -1.5
UBR1-205ENST00000564540 GPC5P78333 572 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 CLCA4Q14CN2 919 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 MFSD13AQ14CX5 517 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 C11orf87Q6NUJ2 197 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 RANBP10Q6VN20 620 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 KRT28Q7Z3Y7 464 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 GLCCI1Q86VQ1 547 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 CCAR1Q8IX12 1150 aaKnown RBP5.71□□□□□ -1.5
UBR1-205ENST00000564540 C12orf76Q8N812 135 aaPredicted RBP5.71□□□□□ -1.5
UBR1-205ENST00000564540 ZNF398Q8TD17 642 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 KAZALD1Q96I82 304 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 VPS50Q96JG6 964 aa5.71□□□□□ -1.5
UBR1-205ENST00000564540 SPRTNQ9H040 489 aaPredicted RBP5.71□□□□□ -1.5
UBR1-205ENST00000564540 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.7□□□□□ -1.5
UBR1-205ENST00000564540 FYB1O15117 783 aa5.7□□□□□ -1.5
UBR1-205ENST00000564540 MYL3P08590 195 aa5.7□□□□□ -1.5
UBR1-205ENST00000564540 STT3AP46977 705 aa5.7□□□□□ -1.5
UBR1-205ENST00000564540 MTAPQ13126 283 aa5.7□□□□□ -1.5
UBR1-205ENST00000564540 SLC14A1Q13336 389 aa5.7□□□□□ -1.5
UBR1-205ENST00000564540 SAFBQ15424 915 aaKnown RBP eCLIP5.7□□□□□ -1.5
UBR1-205ENST00000564540 Q4G0T1 1027 aa5.7□□□□□ -1.5
UBR1-205ENST00000564540 C4orf46Q504U0 113 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms