RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 AVPR2P30518 371 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 CDH5P33151 784 aaPredicted RBP18.16■□□□□ 0.5
USB1-209ENST00000564387 ACADSBP45954 432 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 RGS7P49802 495 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 NUBP1P53384 320 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 TNK2Q07912 1038 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 FZD5Q13467 585 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 ITPRIPL2Q3MIP1 535 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 LRSAM1Q6UWE0 723 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 TPRG1Q6ZUI0 275 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 RALGPS2Q86X27 583 aaPredicted RBP18.16■□□□□ 0.5
USB1-209ENST00000564387 SIX6OS1Q8N1H7 587 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 CSGALNACT1Q8TDX6 532 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 NDRG1Q92597 394 aaKnown RBP18.16■□□□□ 0.5
USB1-209ENST00000564387 CHFRQ96EP1 664 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 MFSD1Q9H3U5 465 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 DUS2Q9NX74 493 aaKnown RBP18.16■□□□□ 0.5
USB1-209ENST00000564387 SMPD4Q9NXE4 827 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 DLGAP2Q9P1A6 1054 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 PIAS3Q9Y6X2 628 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 F5P12259 2224 aa18.16■□□□□ 0.5
USB1-209ENST00000564387 PI15O43692 258 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 SOX5P35711 763 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 VCPP55072 806 aaKnown RBP18.15■□□□□ 0.5
USB1-209ENST00000564387 PDCLQ13371 301 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 FILIP1LQ4L180 1135 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 BSPRYQ5W0U4 402 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 TRIM68Q6AZZ1 485 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 ZNF852Q6ZMS4 543 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 HTR3DQ70Z44 454 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 BEND5Q7L4P6 421 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 SUGP1Q8IWZ8 645 aaKnown RBP18.15■□□□□ 0.5
USB1-209ENST00000564387 ADGRG2Q8IZP9 1017 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 TMEM105Q8N8V8 129 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 PJA1Q8NG27 643 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 NEK11Q8NG66 645 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 EPS8L1Q8TE68 723 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 LINC00597Q9H2U6 94 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 EBF3Q9H4W6 596 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 LTB4R2Q9NPC1 389 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 ABCC13Q9NSE7 274 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 CFAP97Q9P2B7 532 aa18.15■□□□□ 0.5
USB1-209ENST00000564387 NOCTQ9UK39 431 aaKnown RBP18.15■□□□□ 0.5
USB1-209ENST00000564387 SPECC1L-ADORA2AF8WAN1 911 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 SLC9A3R1O14745 358 aaPredicted RBP18.14■□□□□ 0.49
USB1-209ENST00000564387 PAPSS1O43252 624 aaPredicted RBP18.14■□□□□ 0.49
USB1-209ENST00000564387 LCP1P13796 627 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 ARSAP15289 507 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 CTHP32929 405 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 KRT9P35527 623 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 C10orf120Q5SQS8 335 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 MSANTD2Q6P1R3 559 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 NOP9Q86U38 636 aaKnown RBP18.14■□□□□ 0.49
USB1-209ENST00000564387 ZNF677Q86XU0 584 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 SCUBE3Q8IX30 993 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 FLCNQ8NFG4 579 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 ATP2A3Q93084 1043 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 WBP2Q969T9 261 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 CLDN23Q96B33 292 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 OTUB2Q96DC9 234 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 ECT2Q9H8V3 914 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 NLRC4Q9NPP4 1024 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 OLA1Q9NTK5 396 aaKnown RBP18.14■□□□□ 0.49
USB1-209ENST00000564387 TBC1D14Q9P2M4 693 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 NUDT5Q9UKK9 219 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 WNT6Q9Y6F9 365 aa18.14■□□□□ 0.49
USB1-209ENST00000564387 WDFY4Q6ZS81 3184 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 SART1O43290 800 aaKnown RBP18.13■□□□□ 0.49
USB1-209ENST00000564387 FYNP06241 537 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 PBX1P40424 430 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 IFNAR2P48551 515 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 TPM4P67936 248 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 FANCCQ00597 558 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 BTBD8Q5XKL5 378 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 Q6ZNB5 142 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 CCDC105Q8IYK2 499 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 CLEC4CQ8WTT0 213 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 FAM3CQ92520 227 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 CPXM1Q96SM3 734 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 FOXQ1Q9C009 403 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 NACA2Q9H009 215 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 KCNH6Q9H252 994 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 MYO6Q9UM54 1294 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 MRPS17Q9Y2R5 130 aaKnown RBP18.13■□□□□ 0.49
USB1-209ENST00000564387 SIT1Q9Y3P8 196 aa18.13■□□□□ 0.49
USB1-209ENST00000564387 MTF2Q9Y483 593 aaPredicted RBP18.13■□□□□ 0.49
USB1-209ENST00000564387 E5RJQ4 531 aa18.12■□□□□ 0.49
USB1-209ENST00000564387 PIK3R2O00459 728 aa18.12■□□□□ 0.49
USB1-209ENST00000564387 MDM4O15151 490 aa18.12■□□□□ 0.49
USB1-209ENST00000564387 SERPINC1P01008 464 aa18.12■□□□□ 0.49
USB1-209ENST00000564387 LTFP02788 710 aa18.12■□□□□ 0.49
USB1-209ENST00000564387 CD72P21854 359 aa18.12■□□□□ 0.49
USB1-209ENST00000564387 TARSP26639 723 aaKnown RBP18.12■□□□□ 0.49
USB1-209ENST00000564387 STAT1P42224 750 aa18.12■□□□□ 0.49
USB1-209ENST00000564387 RPS9P46781 194 aaKnown RBP18.12■□□□□ 0.49
USB1-209ENST00000564387 SOX9P48436 509 aa18.12■□□□□ 0.49
USB1-209ENST00000564387 KPNA1P52294 538 aaPredicted RBP18.12■□□□□ 0.49
USB1-209ENST00000564387 ZNF445P59923 1031 aa18.12■□□□□ 0.49
USB1-209ENST00000564387 COG7P83436 770 aa18.12■□□□□ 0.49
USB1-209ENST00000564387 GAB4Q2WGN9 574 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms