RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 LIMD1Q9UGP4 676 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 GUCA1BQ9UMX6 200 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 TFR2Q9UP52 801 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 SORCS3Q9UPU3 1222 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 YIPF1Q9Y548 306 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 INSL5Q9Y5Q6 135 aa17.78■□□□□ 0.44
CMTM3-208ENST00000564247 SIGLEC16A6NMB1 481 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 SLC38A8A6NNN8 435 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 TNFRSF10BO14763 440 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 CCL16O15467 120 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 PAPSS1O43252 624 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-208ENST00000564247 USP17L7P0C7H9 530 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 CSH1P0DML2 217 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 CSH2P0DML3 217 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 KRT3P12035 628 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 YWHAQP27348 245 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 SCNN1AP37088 669 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 SLC5A3P53794 718 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 TWF1Q12792 350 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 IFRD2Q12894 506 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-208ENST00000564247 MAMLD1Q13495 774 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 TCEAL1Q15170 157 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 FAM102AQ5T9C2 384 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-208ENST00000564247 TRIM67Q6ZTA4 783 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 FAM183BPQ6ZVS7 135 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 REXO1L1PQ8IX06 675 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 SCML4Q8N228 414 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 ELMOD1Q8N336 334 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 RNF10Q8N5U6 811 aaKnown RBP17.77■□□□□ 0.44
CMTM3-208ENST00000564247 IRGQQ8WZA9 623 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 ARHGEF26Q96DR7 871 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 NUP85Q9BW27 656 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.77■□□□□ 0.44
CMTM3-208ENST00000564247 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.77■□□□□ 0.44
CMTM3-208ENST00000564247 TJP2Q9UDY2 1190 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 ASB3Q9Y575 518 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 USP3Q9Y6I4 520 aa17.77■□□□□ 0.44
CMTM3-208ENST00000564247 NCANO14594 1321 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 NOTCH4Q99466 2003 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 ATMINO43313 823 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-208ENST00000564247 GABBR2O75899 941 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 COL9A1P20849 921 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 GBP2P32456 591 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-208ENST00000564247 SIGLEC14Q08ET2 396 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 MTMR3Q13615 1198 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 PM20D1Q6GTS8 502 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 GPRIN1Q7Z2K8 1008 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 GRASPQ7Z6J2 395 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-208ENST00000564247 UBALD2Q8IYN6 164 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 ARHGAP18Q8N392 663 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 SCAMP5Q8TAC9 235 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 ZNF564Q8TBZ8 553 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-208ENST00000564247 GPR152Q8TDT2 470 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 ZNF512Q96ME7 567 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-208ENST00000564247 TRIM62Q9BVG3 475 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 ASNSD1Q9NWL6 643 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 EPS15L1Q9UBC2 864 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 LCMT1Q9UIC8 334 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 DUSP10Q9Y6W6 482 aa17.76■□□□□ 0.43
CMTM3-208ENST00000564247 MACROD2A1Z1Q3 448 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 ASGR2P07307 311 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 GLI1P08151 1106 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 DESP17661 470 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 ATF6P18850 670 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 FSHRP23945 695 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 ARHGAP25P42331 645 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 DAOAP59103 153 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 RNASE9P60153 205 aaKnown RBP17.75■□□□□ 0.43
CMTM3-208ENST00000564247 OLFML1Q6UWY5 402 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 SLITRK1Q96PX8 696 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 MYADMQ96S97 322 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 IL37Q9NZH6 218 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 CHORDC1Q9UHD1 332 aaPredicted RBP17.75■□□□□ 0.43
CMTM3-208ENST00000564247 MAGED2Q9UNF1 606 aaPredicted RBP17.75■□□□□ 0.43
CMTM3-208ENST00000564247 SCML2Q9UQR0 700 aa17.75■□□□□ 0.43
CMTM3-208ENST00000564247 A0A0U1RQJ8 604 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 MYO1FO00160 1098 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 KIF5CO60282 957 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 HSF2BPO75031 334 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 MTA2O94776 668 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 HADHBP55084 474 aaKnown RBP17.74■□□□□ 0.43
CMTM3-208ENST00000564247 YWHAZP63104 245 aaKnown RBP17.74■□□□□ 0.43
CMTM3-208ENST00000564247 GET4Q7L5D6 327 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-208ENST00000564247 SLC26A9Q7LBE3 791 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 BMP8AQ7Z5Y6 402 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 DNAJB7Q7Z6W7 309 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-208ENST00000564247 MON1AQ86VX9 555 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 ATRIPQ8WXE1 791 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 FBXO32Q969P5 355 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 FAM149B1Q96BN6 582 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 METTL5Q9NRN9 209 aaKnown RBP17.74■□□□□ 0.43
CMTM3-208ENST00000564247 IGSF9Q9P2J2 1179 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 UXTQ9UBK9 157 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-208ENST00000564247 TRIM10Q9UDY6 481 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 PAXBP1Q9Y5B6 917 aa17.74■□□□□ 0.43
CMTM3-208ENST00000564247 ZFP37Q9Y6Q3 630 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-208ENST00000564247 PATJQ8NI35 1801 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 TCRBV5S1A1TA0A578 114 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 TMEM191CA6NGB0 347 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 TMEM221A6NGB7 291 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms