RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 HOXA9P31269 272 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 USP46P62068 366 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 RPL7AP62424 266 aaKnown RBP13.52□□□□□ -0.25
SPG7-209ENST00000564047 NHLH1Q02575 133 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 IFRD2Q12894 506 aaPredicted RBP13.52□□□□□ -0.25
SPG7-209ENST00000564047 MTMR3Q13615 1198 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 TAF5Q15542 800 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 PPM1LQ5SGD2 360 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 RBM23Q86U06 439 aaKnown RBP13.52□□□□□ -0.25
SPG7-209ENST00000564047 MON1AQ86VX9 555 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 GJD3Q8N144 294 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 ARHGAP18Q8N392 663 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 JOSD2Q8TAC2 188 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 OVCA2Q8WZ82 227 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 NDRG1Q92597 394 aaKnown RBP13.52□□□□□ -0.25
SPG7-209ENST00000564047 GOLGA1Q92805 767 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 PSMG2Q969U7 264 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 TRMT2BQ96GJ1 504 aaKnown RBP13.52□□□□□ -0.25
SPG7-209ENST00000564047 NSUN3Q9H649 340 aaKnown RBP13.52□□□□□ -0.25
SPG7-209ENST00000564047 POPDC2Q9HBU9 364 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 CD320Q9NPF0 282 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 MAN1C1Q9NR34 630 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 IP6K2Q9UHH9 426 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 ANAPC7Q9UJX3 599 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 HCFC2Q9Y5Z7 792 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 CAPN6Q9Y6Q1 641 aa13.52□□□□□ -0.25
SPG7-209ENST00000564047 C2CD4BA6NLJ0 364 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 DPYSL4O14531 572 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 DAB1O75553 588 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 LTFP02788 710 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 HNRNPA1P09651 372 aaKnown RBP eCLIP13.51□□□□□ -0.25
SPG7-209ENST00000564047 GPD1P21695 349 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 FLT3P36888 993 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 NRIP1P48552 1158 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 PSEN1P49768 467 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 RNASE9P60153 205 aaKnown RBP13.51□□□□□ -0.25
SPG7-209ENST00000564047 TAF10Q12962 218 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 TAF12Q16514 161 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 C11orf63Q6NUN7 778 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 DNAJB7Q7Z6W7 309 aaPredicted RBP13.51□□□□□ -0.25
SPG7-209ENST00000564047 SLFN11Q7Z7L1 901 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 SYCE1Q8N0S2 351 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 EMC1Q8N766 993 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 STKLD1Q8NE28 680 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 PDZD8Q8NEN9 1154 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 TRIM58Q8NG06 486 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 RXFP2Q8WXD0 754 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 FBXO32Q969P5 355 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 FAM149B1Q96BN6 582 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 SLITRK1Q96PX8 696 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 ALS2CR12Q96Q35 445 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 SLC2A13Q96QE2 648 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 DDX23Q9BUQ8 820 aaKnown RBP13.51□□□□□ -0.25
SPG7-209ENST00000564047 IRX2Q9BZI1 471 aaPredicted RBP13.51□□□□□ -0.25
SPG7-209ENST00000564047 TRIM7Q9C029 511 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 L2HGDHQ9H9P8 463 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 ZDHHC7Q9NXF8 308 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 UXTQ9UBK9 157 aaPredicted RBP13.51□□□□□ -0.25
SPG7-209ENST00000564047 C5orf42Q9H799 3197 aa13.51□□□□□ -0.25
SPG7-209ENST00000564047 COL4A4P53420 1690 aaPredicted RBP13.5□□□□□ -0.25
SPG7-209ENST00000564047 GRID2IPA4D2P6 1211 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 BUB1BO60566 1050 aaPredicted RBP13.5□□□□□ -0.25
SPG7-209ENST00000564047 PALMO75781 387 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 GRAP2O75791 330 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 PROSCO94903 275 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 FYNP06241 537 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 POU2F2P09086 479 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 ZDHHC11BP0C7U3 371 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 MAN1A1P33908 653 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 NOS2P35228 1153 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 MATKP42679 507 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 PPP3CCP48454 512 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 ZNF143P52747 638 aaPredicted RBP13.5□□□□□ -0.25
SPG7-209ENST00000564047 YWHAGP61981 247 aaKnown RBP eCLIP13.5□□□□□ -0.256e-6■■■■□ 21.1
SPG7-209ENST00000564047 ETF1P62495 437 aaKnown RBP13.5□□□□□ -0.25
SPG7-209ENST00000564047 OGDHQ02218 1023 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 KCNC3Q14003 757 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 PIGHQ14442 188 aaPredicted RBP13.5□□□□□ -0.25
SPG7-209ENST00000564047 MESDQ14696 234 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 ACAP1Q15027 740 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 ZNF569Q5MCW4 686 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 BSPRYQ5W0U4 402 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 TRNP1Q6NT89 227 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 HFE2Q6ZVN8 426 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 SCD5Q86SK9 330 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 DEFB106AQ8N104 65 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 ELMOD1Q8N336 334 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 NIPA2Q8N8Q9 360 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 LRRC57Q8N9N7 239 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 UBE2Q2Q8WVN8 375 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 ANKRD7Q92527 254 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 BTBD6Q96KE9 485 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 ZNF512Q96ME7 567 aaPredicted RBP13.5□□□□□ -0.25
SPG7-209ENST00000564047 CNPY3Q9BT09 278 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 TLR8Q9NR97 1041 aaKnown RBP13.5□□□□□ -0.25
SPG7-209ENST00000564047 ABCC13Q9NSE7 274 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 RRN3Q9NYV6 651 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.5□□□□□ -0.25
SPG7-209ENST00000564047 CLIC5Q9NZA1 410 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 GMIPQ9P107 970 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms