RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 L3MBTL3Q96JM7 780 aaPredicted RBP20.78■□□□□ 0.92
MSLN-205ENST00000563941 ZMAT2Q96NC0 199 aaKnown RBP20.78■□□□□ 0.92
MSLN-205ENST00000563941 ZNF670Q9BS34 389 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 B3GNT5Q9BYG0 378 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 KLC2Q9H0B6 622 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 ALG13Q9NP73 1137 aaKnown RBP20.78■□□□□ 0.92
MSLN-205ENST00000563941 ETNK2Q9NVF9 386 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.78■□□□□ 0.92
MSLN-205ENST00000563941 KAT6AQ92794 2004 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 GABBR2O75899 941 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 HDAC4P56524 1084 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 SLC18A2Q05940 514 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 PPP6R3Q5H9R7 873 aaPredicted RBP20.78■□□□□ 0.92
MSLN-205ENST00000563941 SH2D5Q6ZV89 423 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 GPRC5AQ8NFJ5 357 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 TACO1Q9BSH4 297 aaKnown RBP20.78■□□□□ 0.92
MSLN-205ENST00000563941 YY1AP1Q9H869 796 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 POPDC2Q9HBU9 364 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 SNTG2Q9NY99 539 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 RNF181Q9P0P0 153 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 TUBGCP4Q9UGJ1 667 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 DERAQ9Y315 318 aa20.78■□□□□ 0.92
MSLN-205ENST00000563941 DHRS4L1P0CG22 281 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 PYGBP11216 843 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 ETV4P43268 484 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 OVGP1Q12889 678 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 SNAPC2Q13487 334 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 KIZQ2M2Z5 673 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 PARP6Q2NL67 630 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 PLEKHG4Q58EX7 1191 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 SLC45A4Q5BKX6 768 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 LRRN4Q8WUT4 740 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 INPP5DQ92835 1189 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 SNX27Q96L92 541 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 KATNBL1Q9H079 304 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 EBF2Q9HAK2 575 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 PLEKHA5Q9HAU0 1116 aa20.77■□□□□ 0.92
MSLN-205ENST00000563941 C1QAP02745 245 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 APRTP07741 180 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 T-ENOLP0DO92 83 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 TFE3P19532 575 aaPredicted RBP20.77■□□□□ 0.91
MSLN-205ENST00000563941 CCND1P24385 295 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 CYP2F1P24903 491 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 MAGEA6P43360 314 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 CCNA1P78396 465 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 ACCSLQ4AC99 568 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 TAF1BQ53T94 588 aaPredicted RBP20.77■□□□□ 0.91
MSLN-205ENST00000563941 ZNF449Q6P9G9 518 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 CAND1Q86VP6 1230 aaKnown RBP20.77■□□□□ 0.91
MSLN-205ENST00000563941 SLC26A11Q86WA9 606 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 RFWD2Q8NHY2 731 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 CCDC110Q8TBZ0 833 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 FAM111AQ96PZ2 611 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 LPIN3Q9BQK8 851 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 NRDE2Q9H7Z3 1164 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 ZC3H7BQ9UGR2 993 aaKnown RBP20.77■□□□□ 0.91
MSLN-205ENST00000563941 ZFP69BQ9UJL9 534 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 DCTN4Q9UJW0 460 aa20.77■□□□□ 0.91
MSLN-205ENST00000563941 FAM155BO75949 473 aa20.76■□□□□ 0.91
MSLN-205ENST00000563941 HOXA11P31270 313 aaPredicted RBP20.76■□□□□ 0.91
MSLN-205ENST00000563941 SNX16P57768 344 aa20.76■□□□□ 0.91
MSLN-205ENST00000563941 SPDYAQ5MJ70 313 aa20.76■□□□□ 0.91
MSLN-205ENST00000563941 TTC39BQ5VTQ0 682 aaPredicted RBP20.76■□□□□ 0.91
MSLN-205ENST00000563941 CHSY1Q86X52 802 aa20.76■□□□□ 0.91
MSLN-205ENST00000563941 ZDHHC17Q8IUH5 632 aa20.76■□□□□ 0.91
MSLN-205ENST00000563941 CDKL3Q8IVW4 592 aaPredicted RBP20.76■□□□□ 0.91
MSLN-205ENST00000563941 CTAGE3PQ8IX95 158 aa20.76■□□□□ 0.91
MSLN-205ENST00000563941 PPM1NQ8N819 430 aa20.76■□□□□ 0.91
MSLN-205ENST00000563941 OR6B3Q8NGW1 331 aa20.76■□□□□ 0.91
MSLN-205ENST00000563941 NCAPGQ9BPX3 1015 aa20.76■□□□□ 0.91
MSLN-205ENST00000563941 TSSK1BQ9BXA7 367 aa20.76■□□□□ 0.91
MSLN-205ENST00000563941 KANSL3Q9P2N6 904 aa20.76■□□□□ 0.91
MSLN-205ENST00000563941 GINS2Q9Y248 185 aa20.76■□□□□ 0.91
MSLN-205ENST00000563941 TMEM62Q0P6H9 643 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 STK32AQ8WU08 396 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 TTC17Q96AE7 1141 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 C18orf25Q96B23 403 aaPredicted RBP20.75■□□□□ 0.91
MSLN-205ENST00000563941 SLC7A6OSQ96CW6 309 aaPredicted RBP20.75■□□□□ 0.91
MSLN-205ENST00000563941 EIF2AQ9BY44 585 aaKnown RBP20.75■□□□□ 0.91
MSLN-205ENST00000563941 DPEP3Q9H4B8 488 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 ZNF487B1APH4 448 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 CBX6O95503 412 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 ZBTB6Q15916 424 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 GLRA4Q5JXX5 417 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 SLC27A1Q6PCB7 646 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 MTDHQ86UE4 582 aaKnown RBP20.75■□□□□ 0.91
MSLN-205ENST00000563941 LRRC6Q86X45 466 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 LRRC52Q8N7C0 313 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 BEST2Q8NFU1 509 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 GIMAP7Q8NHV1 300 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 CLEC4CQ8WTT0 213 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 GTF3C2Q8WUA4 911 aaPredicted RBP20.75■□□□□ 0.91
MSLN-205ENST00000563941 TRIM55Q9BYV6 548 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 PLAC1Q9HBJ0 212 aa20.75■□□□□ 0.91
MSLN-205ENST00000563941 CXorf49A8MYA2 514 aaPredicted RBP20.74■□□□□ 0.91
MSLN-205ENST00000563941 TRIM49D1C9J1S8 452 aa20.74■□□□□ 0.91
MSLN-205ENST00000563941 HCRTO43612 131 aa20.74■□□□□ 0.91
MSLN-205ENST00000563941 WFS1O76024 890 aa20.74■□□□□ 0.91
MSLN-205ENST00000563941 SNAI1O95863 264 aaPredicted RBP20.74■□□□□ 0.91
MSLN-205ENST00000563941 MMP3P08254 477 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms