RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ERBB2P04626 1255 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 STIP1P31948 543 aaKnown RBP12.26□□□□□ -0.45
ABCA3-203ENST00000563623 SESN2P58004 480 aaPredicted RBP12.26□□□□□ -0.45
ABCA3-203ENST00000563623 ABHD15Q6UXT9 468 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 PPP4R1Q8TF05 950 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 MIS12Q9H081 205 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 LMCD1Q9NZU5 365 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 PPM1HQ9ULR3 514 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 ZNF232Q9UNY5 417 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 HMGCRP04035 888 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 GJB1P08034 283 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 ATXN3P54252 364 aaPredicted RBP12.26□□□□□ -0.45
ABCA3-203ENST00000563623 SLC25A11Q02978 314 aaKnown RBP12.26□□□□□ -0.45
ABCA3-203ENST00000563623 PEX6Q13608 980 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 TRIP10Q15642 601 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 DNAL1Q4LDG9 190 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 TRMT10BQ6PF06 316 aaKnown RBP12.26□□□□□ -0.45
ABCA3-203ENST00000563623 WDR49Q8IV35 697 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 ARFGAP1Q8N6T3 406 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 ZNF518BQ9C0D4 1074 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 KRT82Q9NSB4 513 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 KCNK4Q9NYG8 393 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 PAK5Q9P286 719 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 SLC7A8Q9UHI5 535 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 NR2E3Q9Y5X4 410 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 CNTNAP2Q9UHC6 1331 aa12.26□□□□□ -0.45
ABCA3-203ENST00000563623 SYNJ2BP-COX16A0A087WUM0 186 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 WNT10BO00744 389 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 STK10O94804 968 aaKnown RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 LYNP07948 512 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 CNTN2Q02246 1040 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 CUL3Q13618 768 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 KRT72Q14CN4 511 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 TRMT5Q32P41 509 aaKnown RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 ACBD5Q5T8D3 534 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 LPCAT4Q643R3 524 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 STYK1Q6J9G0 422 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 MFN1Q8IWA4 741 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 PANX3Q96QZ0 392 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 COX16Q9P0S2 106 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 CYTH4Q9UIA0 394 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 PLLPQ9Y342 182 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 A8MXQ7 604 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 OGTO15294 1046 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 TRUB2O95900 331 aaKnown RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 GSTA2P09210 222 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 STAT5BP51692 787 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 YWHAZP63104 245 aaKnown RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 STXBP2Q15833 593 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 TCHHL1Q5QJ38 904 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 CHSY1Q86X52 802 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 TRIM50Q86XT4 487 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 ST13P4Q8IZP2 240 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 TUBGCP5Q96RT8 1024 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 ECSITQ9BQ95 431 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 XAB2Q9HCS7 855 aaKnown RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 PDP2Q9P2J9 529 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 SLC17A6Q9P2U8 582 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 PPP1R1BQ9UD71 204 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 APOL1O14791 398 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 MAFGO15525 162 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 ADCY3O60266 1144 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 RGS20O76081 388 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 RTN3O95197 1032 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 CXCL8P10145 99 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 DESP17661 470 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 GSTT1P30711 240 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 SP2Q02086 613 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 MTA1Q13330 715 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 FASTKD1Q53R41 847 aaKnown RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 SDCCAG8Q86SQ7 713 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 ZNF276Q8N554 614 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 RPF1Q9H9Y2 349 aaKnown RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 SIPA1L1O43166 1804 aa12.25□□□□□ -0.45
ABCA3-203ENST00000563623 ZNFX1Q9P2E3 1918 aaKnown RBP12.25□□□□□ -0.45
ABCA3-203ENST00000563623 NOP56O00567 594 aaKnown RBP12.24□□□□□ -0.45
ABCA3-203ENST00000563623 ABLIM1O14639 778 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 STBD1O95210 358 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 TGDSO95455 350 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 ITGB3P05106 788 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 CSH1P0DML2 217 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 CSH2P0DML3 217 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 SAT1P21673 171 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 GPD1P21695 349 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 ETV4P43268 484 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 RTP1P59025 263 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 RALGPS1Q5JS13 557 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 UNC5BQ8IZJ1 945 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.24□□□□□ -0.45
ABCA3-203ENST00000563623 STKLD1Q8NE28 680 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 MZB1Q8WU39 189 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 EPAS1Q99814 870 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 DHX35Q9H5Z1 703 aaKnown RBP12.24□□□□□ -0.45
ABCA3-203ENST00000563623 HMGXB4Q9UGU5 601 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 PFDN1O60925 122 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 SPAG6O75602 509 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 MICAL2O94851 1124 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 PROCP04070 461 aa12.24□□□□□ -0.45
ABCA3-203ENST00000563623 MED21Q13503 144 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms