RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 AQP7P3A6NL99 342 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 VSTM5A8MXK1 200 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 GOLIM4O00461 696 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 TRIM38O00635 465 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 TSPAN6O43657 245 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 ZBED1O96006 694 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 CYP19A1P11511 503 aaPredicted RBP4□□□□□ -1.77
HMGB1P33-201ENST00000563485 BTF3P20290 206 aaKnown RBP4□□□□□ -1.77
HMGB1P33-201ENST00000563485 PEX2P28328 305 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 KRTAP10-9P60411 292 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 CFHR3Q02985 330 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 ZNF91Q05481 1191 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 SLC14A1Q13336 389 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 FHL1Q13642 323 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 MFSD13AQ14CX5 517 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 TRIM71Q2Q1W2 868 aaKnown RBP4□□□□□ -1.77
HMGB1P33-201ENST00000563485 CC2D1BQ5T0F9 858 aaKnown RBP4□□□□□ -1.77
HMGB1P33-201ENST00000563485 C10orf25Q5T742 122 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 PLAG1Q6DJT9 500 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 PPP4R4Q6NUP7 873 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 VSTM1Q6UX27 236 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 CLEC9AQ6UXN8 241 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 CHST15Q7LFX5 561 aaPredicted RBP4□□□□□ -1.77
HMGB1P33-201ENST00000563485 IRF2BP2Q7Z5L9 587 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 SRGAP1Q7Z6B7 1085 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 MRPL10Q7Z7H8 261 aaKnown RBP4□□□□□ -1.77
HMGB1P33-201ENST00000563485 SMCR8Q8TEV9 937 aaPredicted RBP4□□□□□ -1.77
HMGB1P33-201ENST00000563485 KAZALD1Q96I82 304 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 HIST1H2AAQ96QV6 131 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 FAM83DQ9H4H8 585 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 TMEM184CQ9NVA4 438 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 DNAJB11Q9UBS4 358 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 NKX1-2Q9UD57 310 aaPredicted RBP4□□□□□ -1.77
HMGB1P33-201ENST00000563485 RGS17Q9UGC6 210 aaPredicted RBP4□□□□□ -1.77
HMGB1P33-201ENST00000563485 SLC27A6Q9Y2P4 619 aa4□□□□□ -1.77
HMGB1P33-201ENST00000563485 FRMPD2Q68DX3 1309 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 A8MVJ9 347 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 CLIC1O00299 241 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 MGEA5O60502 916 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 HRGP04196 525 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 CD19P15391 556 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 ADRA1DP25100 572 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 THBS4P35443 961 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 POLGP54098 1239 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 FOXG1P55316 489 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 YPEL5P62699 121 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 FAM193AP78312 1265 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 CFHR1Q03591 330 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 ST3GAL2Q16842 350 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 TMEM63BQ5T3F8 832 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 MANEALQ5VSG8 457 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 MYO1HQ8N1T3 1032 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 C12orf76Q8N812 135 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 PNPLA1Q8N8W4 532 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 IGFBPL1Q8WX77 278 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 ZNF668Q96K58 619 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 USP29Q9HBJ7 922 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 AS3MTQ9HBK9 375 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 PI4KBQ9UBF8 816 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 STEAP1Q9UHE8 339 aa3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 G3BP2Q9UN86 482 aaKnown RBP3.99□□□□□ -1.77
HMGB1P33-201ENST00000563485 LY6G6EA0A0G2JKS1 128 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 F8W8V4 182 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 IKBKBO14920 756 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 FYB1O15117 783 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 CA12O43570 354 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 PRAMEF2O60811 474 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 INMTO95050 263 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 YY1P25490 414 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 RBL1P28749 1068 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 HTR7P34969 479 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 COPAP53621 1224 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 LINC00205P59089 165 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 EIF4A1P60842 406 aaKnown RBP3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 GPC5P78333 572 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 GALEQ14376 348 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 GBX1Q14549 363 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 PIP4P1Q86T03 277 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 NGDNQ8NEJ9 315 aaKnown RBP3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 MSLNLQ96KJ4 702 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 SNX22Q96L94 193 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 SELENOOQ9BVL4 669 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 TBC1D23Q9NUY8 699 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 ZNF212Q9UDV6 495 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 TCEAL9Q9UHQ7 104 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 FZD4Q9ULV1 537 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 CAPN11Q9UMQ6 739 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 HPSEQ9Y251 543 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 PCDHGB6Q9Y5F9 930 aa3.98□□□□□ -1.77
HMGB1P33-201ENST00000563485 TLR2O60603 784 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 SNX2O60749 519 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 MT-ND5P03915 603 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 HTRA4P83105 476 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 TXNL4AP83876 142 aaKnown RBP3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 ID2Q02363 134 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 CLCA4Q14CN2 919 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 GRHL2Q6ISB3 625 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 ANO7Q6IWH7 933 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 MZT2AQ6P582 158 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms