RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 WEE2P0C1S8 567 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 RRM2P31350 389 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 FAM122CQ6P4D5 195 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 FRMD7Q6ZUT3 714 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ZCCHC9Q8N567 271 aaKnown RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 BHLHE22Q8NFJ8 381 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 MAP3K14Q99558 947 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 OXCT2Q9BYC2 517 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 GDAP2Q9NXN4 497 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 XPO7Q9UIA9 1087 aaKnown RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 TNFRSF10AO00220 468 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 CLPXO76031 633 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 LDLRP01130 860 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 MSLNQ13421 630 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 RFX4Q33E94 735 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 METTL21CQ5VZV1 264 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 BORAQ6PGQ7 559 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 NDUFAF2Q8N183 169 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 AADATQ8N5Z0 425 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 NFATC2IPQ8NCF5 419 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 PURBQ96QR8 312 aaKnown RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 TUBA1CQ9BQE3 449 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 SENP7Q9BQF6 1050 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 NCAPD2Q15021 1401 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 GOLGA8SH3BPF8 625 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 PSMD12O00232 456 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 TNPO2O14787 897 aaKnown RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 MYCLP1P12525 358 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 ACLYP53396 1101 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 FAPQ12884 760 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 KLHL35Q6PF15 583 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 CRTC3Q6UUV7 619 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 PDSS2Q86YH6 399 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ANKRD13BQ86YJ7 626 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 SYTL1Q8IYJ3 562 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ART4Q93070 314 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ANO3Q9BYT9 981 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ZMAT5Q9UDW3 170 aaKnown RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 LGALS13Q9UHV8 139 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 ZSCAN5CA6NGD5 496 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 ARHGEF33A8MVX0 844 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 PRPSAP2O60256 369 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ETV1P50549 477 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 YWHAHQ04917 246 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 TRIM32Q13049 653 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 PTK6Q13882 451 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 PPM1LQ5SGD2 360 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ARMC8Q8IUR7 673 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 HAPLN3Q96S86 360 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 GLS2Q9UI32 602 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 NCKAP5LQ9HCH0 1330 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 LOC100653049A0A140TA62 436 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 KRT34O76011 436 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 PROCP04070 461 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 SHBGP04278 402 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ATXN3P54252 364 aaPredicted RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 RELAQ04206 551 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 NAB1Q13506 487 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ARL13BQ3SXY8 428 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 FASTKD5Q7L8L6 764 aaKnown RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 PACRGLQ8N7B6 248 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 TRUB1Q8WWH5 349 aaKnown RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 DNAJC1Q96KC8 554 aaKnown RBP6.45□□□□□ -1.38
CLK3-212ENST00000563418 TOR4AQ9NXH8 423 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 APEX2Q9UBZ4 518 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 LMTK2Q8IWU2 1503 aa6.45□□□□□ -1.38
CLK3-212ENST00000563418 ZNF806P0C7X5 589 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 PLA2G4BP0C869 781 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 NME5P56597 212 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 GPSM2P81274 684 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 AMIGO2Q86SJ2 522 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 IFNL2Q8IZJ0 200 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 DNAAF3Q8N9W5 541 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 SEC31BQ9NQW1 1179 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 TTLL3Q9Y4R7 772 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 SLC30A1Q9Y6M5 507 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 EFCAB10A6NFE3 127 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 POTEMA6NI47 508 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 SLC22A2O15244 555 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 GABBR2O75899 941 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 SAT1P21673 171 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 FECHP22830 423 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 PSMB9P28065 219 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 AQP4P55087 323 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 BNIP2Q12982 314 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 NCF4Q15080 339 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 TRIP4Q15650 581 aaPredicted RBP6.44□□□□□ -1.38
CLK3-212ENST00000563418 HSD17B12Q53GQ0 312 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 GARNL3Q5VVW2 1013 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 POTEGQ6S5H5 508 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 ADGRG6Q86SQ4 1221 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 SAPCD2Q86UD0 394 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 DENND6AQ8IWF6 608 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 SPAG16Q8N0X2 631 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 PJA1Q8NG27 643 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 SLA2Q9H6Q3 261 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 AP3M1Q9Y2T2 418 aa6.44□□□□□ -1.38
CLK3-212ENST00000563418 TRAFD1O14545 582 aaPredicted RBP6.44□□□□□ -1.38
CLK3-212ENST00000563418 DNAJB5O75953 348 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms