RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 CYP2W1Q8TAV3 490 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 OVCA2Q8WZ82 227 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 ZNF566Q969W8 418 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 CTHRC1Q96CG8 243 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 LRRC46Q96FV0 321 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 ZBTB45Q96K62 511 aaPredicted RBP3.48□□□□□ -1.85
CHD9-207ENST00000562806 NLRC4Q9NPP4 1024 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 NECTIN3Q9NQS3 549 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 RIMKLBQ9ULI2 386 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 PHTF1Q9UMS5 762 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 TBC1D30Q9Y2I9 924 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 OR2W5A6NFC9 320 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 PRRT4C9JH25 899 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 TMEM232C9JQI7 657 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 SPRY2O43597 315 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 WDR47O94967 919 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 GLP2RO95838 553 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 TUBB4AP04350 444 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 TNFSF4P23510 183 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 ALDH5A1P51649 535 aaPredicted RBP3.47□□□□□ -1.85
CHD9-207ENST00000562806 NSUN2Q08J23 767 aaKnown RBP eCLIP3.47□□□□□ -1.85
CHD9-207ENST00000562806 LMAN2Q12907 356 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 GPS1Q13098 491 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 ATP1A4Q13733 1029 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 ACOX1Q15067 660 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 MAPKAPK3Q16644 382 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 FAM187BQ17R55 369 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 HIBCHQ6NVY1 386 aaPredicted RBP3.47□□□□□ -1.85
CHD9-207ENST00000562806 TMEM65Q6PI78 240 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 FBXO38Q6PIJ6 1188 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 CLEC9AQ6UXN8 241 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 ZNF813Q6ZN06 617 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 USP49Q70CQ1 688 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 NOL8Q76FK4 1167 aaKnown RBP3.47□□□□□ -1.85
CHD9-207ENST00000562806 BCDIN3DQ7Z5W3 292 aaKnown RBP3.47□□□□□ -1.85
CHD9-207ENST00000562806 SRRM1Q8IYB3 904 aaKnown RBP3.47□□□□□ -1.85
CHD9-207ENST00000562806 C16orf71Q8IYS4 520 aaPredicted RBP3.47□□□□□ -1.85
CHD9-207ENST00000562806 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.47□□□□□ -1.85
CHD9-207ENST00000562806 FAM71DQ8N9W8 422 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 SUN3Q8TAQ9 357 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 DEPTORQ8TB45 409 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 GJA10Q969M2 543 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 RIPOR3Q96MK2 946 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 HS6ST2Q96MM7 605 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 ELAC2Q9BQ52 826 aaKnown RBP3.47□□□□□ -1.85
CHD9-207ENST00000562806 ARFGAP3Q9NP61 516 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 HELLSQ9NRZ9 838 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 SERGEFQ9UGK8 458 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 SLC27A6Q9Y2P4 619 aa3.47□□□□□ -1.85
CHD9-207ENST00000562806 SPATA31A1Q5TZJ5 1347 aa3.46□□□□□ -1.85
CHD9-207ENST00000562806 MANSC4A6NHS7 340 aaPredicted RBP3.46□□□□□ -1.86
CHD9-207ENST00000562806 TTC34A8MYJ7 566 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 VNN1O95497 513 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 VIPP01282 170 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 ERBB2P04626 1255 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 EGR1P18146 543 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 MATN1P21941 496 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 EEF1GP26641 437 aaKnown RBP3.46□□□□□ -1.86
CHD9-207ENST00000562806 DIO1P49895 249 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 RENBPP51606 427 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 PROK1P58294 105 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 TFF2Q03403 129 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 CCDC15Q0P6D6 951 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 KCNAB1Q14722 419 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 LARS2Q15031 903 aaKnown RBP3.46□□□□□ -1.86
CHD9-207ENST00000562806 EZH2Q15910 746 aaKnown RBP3.46□□□□□ -1.86
CHD9-207ENST00000562806 RNASE12Q5GAN4 147 aaKnown RBP3.46□□□□□ -1.86
CHD9-207ENST00000562806 RRAGBQ5VZM2 374 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 ANO7Q6IWH7 933 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 CRTC1Q6UUV9 634 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 RINLQ6ZS11 566 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 KIAA0408Q6ZU52 694 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 LIX1LQ8IVB5 337 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 P3H2Q8IVL5 708 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 CCDC146Q8IYE0 955 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 LINC01465Q8N7H1 131 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 PNLDC1Q8NA58 520 aaKnown RBP3.46□□□□□ -1.86
CHD9-207ENST00000562806 HIC2Q96JB3 615 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 MMS19Q96T76 1030 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 FAM118BQ9BPY3 351 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 RNF26Q9BY78 433 aaPredicted RBP3.46□□□□□ -1.86
CHD9-207ENST00000562806 CERS4Q9HA82 394 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 NRIP3Q9NQ35 241 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 RGL1Q9NZL6 768 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 PI4KBQ9UBF8 816 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 NFU1Q9UMS0 254 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 MAN2B2Q9Y2E5 1009 aa3.46□□□□□ -1.86
CHD9-207ENST00000562806 SMIM22K7EJ46 135 aa3.45□□□□□ -1.86
CHD9-207ENST00000562806 PPP6CO00743 305 aa3.45□□□□□ -1.86
CHD9-207ENST00000562806 ZSCAN9O15535 394 aaPredicted RBP3.45□□□□□ -1.86
CHD9-207ENST00000562806 PDE8BO95263 885 aa3.45□□□□□ -1.86
CHD9-207ENST00000562806 LATS1O95835 1130 aa3.45□□□□□ -1.86
CHD9-207ENST00000562806 CELA2AP08217 269 aa3.45□□□□□ -1.86
CHD9-207ENST00000562806 MYL3P08590 195 aa3.45□□□□□ -1.86
CHD9-207ENST00000562806 GABRB3P28472 473 aa3.45□□□□□ -1.86
CHD9-207ENST00000562806 COPB1P53618 953 aaKnown RBP3.45□□□□□ -1.86
CHD9-207ENST00000562806 PSG6Q00889 435 aa3.45□□□□□ -1.86
CHD9-207ENST00000562806 SRSF4Q08170 494 aaKnown RBP3.45□□□□□ -1.86
CHD9-207ENST00000562806 DNASE1L3Q13609 305 aa3.45□□□□□ -1.86
CHD9-207ENST00000562806 KCNJ12Q14500 433 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms