RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 PHKG2P15735 406 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 RPL17P18621 184 aaKnown RBP3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 KLRC1P26715 233 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 HOXD9P28356 352 aaPredicted RBP3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 CDC25AP30304 524 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 PDE6CP51160 858 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 SRSF1Q07955 248 aaKnown RBP eCLIP3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 MYO1EQ12965 1108 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 PLA1AQ53H76 456 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 ZNF549Q6P9A3 640 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 GSG1LQ6UXU4 331 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 DEF8Q6ZN54 512 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 SLC15A3Q8IY34 581 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 MPLKIPQ8TAP9 179 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 ATG4AQ8WYN0 398 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 SPSB4Q96A44 273 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 NMD3Q96D46 503 aaKnown RBP3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 APIPQ96GX9 242 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 PPP1R9BQ96SB3 815 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 ZPBPQ9BS86 351 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 STK32BQ9NY57 414 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 CPNE7Q9UBL6 633 aa3.8□□□□□ -1.8
HDGFL3-202ENST00000562702 hCG_1984214I3L0E3 225 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 TLR2O60603 784 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 MAP4K4O95819 1239 aaPredicted RBP3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 TOMM40O96008 361 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 MYCLP12524 364 aaPredicted RBP3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 ZKSCAN1P17029 563 aaPredicted RBP3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 ALDH5A1P51649 535 aaPredicted RBP3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 PRKAG1P54619 331 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 SEMA5AQ13591 1074 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 FHL3Q13643 280 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 GALEQ14376 348 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 HLTFQ14527 1009 aaKnown RBP eCLIP3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 INSCQ1MX18 579 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 HSP90AB2PQ58FF8 381 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 DGKKQ5KSL6 1271 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 TMEM63BQ5T3F8 832 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 DCAF12L1Q5VU92 463 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 MICU3Q86XE3 530 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 ZNF280BQ86YH2 543 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 RAPGEF4Q8WZA2 1011 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 MAML1Q92585 1016 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 TIFAQ96CG3 184 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 WBP1Q96G27 269 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 THAP7Q9BT49 309 aaPredicted RBP3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 BTBD1Q9H0C5 482 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 NUP62CLQ9H1M0 184 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 CXorf36Q9H7Y0 433 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 TRMT13Q9NUP7 481 aaKnown RBP3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 HEY2Q9UBP5 337 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 SSX2IPQ9Y2D8 614 aa3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 MRPS17Q9Y2R5 130 aaKnown RBP3.79□□□□□ -1.8
HDGFL3-202ENST00000562702 LOC102723971A0A1B0GUV8 181 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 C4orf47A7E2U8 309 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 TMEM233B4DJY2 109 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 PYCARD-AS1I3L0S3 204 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 FOXN3O00409 490 aaPredicted RBP3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 CCP110O43303 1012 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 RASSF9O75901 435 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 CYP19A1P11511 503 aaPredicted RBP3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 KCNA3P22001 575 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 DGKEP52429 567 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 RPS16P62249 146 aaKnown RBP3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 RPS13P62277 151 aaKnown RBP3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 FMO1Q01740 532 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 ZIK1Q3SY52 487 aaPredicted RBP3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 ZNF585BQ52M93 769 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 CERCAMQ5T4B2 595 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 CYB5RLQ6IPT4 315 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 SPARTQ8N0X7 666 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 OR56A3Q8NH54 315 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 BPIFB1Q8TDL5 484 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 SMCR8Q8TEV9 937 aaPredicted RBP3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 OSCP1Q8WVF1 389 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 IPCEF1Q8WWN9 437 aaPredicted RBP3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 ZFYVE19Q96K21 471 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 MSLNLQ96KJ4 702 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 TMEM204Q9BSN7 226 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 XPNPEP3Q9NQH7 507 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 DDX21Q9NR30 783 aaKnown RBP eCLIP3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 GEMIN8Q9NWZ8 242 aaKnown RBP3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 MAFFQ9ULX9 164 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 PCDHGB6Q9Y5F9 930 aa3.78□□□□□ -1.8
HDGFL3-202ENST00000562702 INMTO95050 263 aa3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 CSF1RP07333 972 aa3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 HMGB1P09429 215 aaKnown RBP3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 C3orf38Q5JPI3 329 aa3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 DEPDC1Q5TB30 811 aa3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 CACHD1Q5VU97 1274 aa3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 PIP4P1Q86T03 277 aa3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 SESTD1Q86VW0 696 aa3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 CCAR1Q8IX12 1150 aaKnown RBP3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 YAF2Q8IY57 180 aa3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 ZNF398Q8TD17 642 aa3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 LENG8Q96PV6 779 aaPredicted RBP3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 STRBPQ96SI9 672 aaKnown RBP3.77□□□□□ -1.81
HDGFL3-202ENST00000562702 MEIS3Q99687 375 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms