RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 DFFAO00273 331 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 EPHB6O15197 1021 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 EIF3HO15372 352 aaKnown RBP eCLIP7.83□□□□□ -1.16
TCF4-216ENST00000562680 KDM1AO60341 852 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 ATP1A2P50993 1020 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 ACLYP53396 1101 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 AIF1P55008 147 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 CDH8P55286 799 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 KBTBD12Q3ZCT8 623 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 PABPC1LQ4VXU2 614 aaKnown RBP7.83□□□□□ -1.16
TCF4-216ENST00000562680 BTN2A1Q7KYR7 527 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 PPHLN1Q8NEY8 458 aaKnown RBP7.83□□□□□ -1.16
TCF4-216ENST00000562680 SNX27Q96L92 541 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 RBM15Q96T37 977 aaKnown RBP eCLIP7.83□□□□□ -1.16
TCF4-216ENST00000562680 DCLK3Q9C098 648 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 WRAP73Q9P2S5 460 aaPredicted RBP7.83□□□□□ -1.16
TCF4-216ENST00000562680 PADI3Q9ULW8 664 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 STYXL1Q9Y6J8 313 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 DOCK2Q92608 1830 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 MYH8P13535 1937 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 ESYT3A0FGR9 886 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 GMNNO75496 209 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 AGTP01019 485 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 LTFP02788 710 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 DNAJB2P25686 324 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 FLT3P36888 993 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 PAN2Q504Q3 1202 aaKnown RBP7.83□□□□□ -1.16
TCF4-216ENST00000562680 ERMARDQ5T6L9 678 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 DLK2Q6UY11 383 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 ZBED8Q8IZ13 594 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.83□□□□□ -1.16
TCF4-216ENST00000562680 CALML6Q8TD86 181 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 HELQQ8TDG4 1101 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 STK32AQ8WU08 396 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 HINFPQ9BQA5 517 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 TTYH3Q9C0H2 523 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 MMADHCQ9H3L0 296 aaPredicted RBP7.83□□□□□ -1.16
TCF4-216ENST00000562680 HIPK3Q9H422 1215 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 CNGB3Q9NQW8 809 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 KLHL11Q9NVR0 708 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 PCDHGC3Q9UN70 934 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 DUSP10Q9Y6W6 482 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 CIB2O75838 187 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 SNAI1O95863 264 aaPredicted RBP7.83□□□□□ -1.16
TCF4-216ENST00000562680 TAC1P20366 129 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 GEMP55040 296 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 GEMIN4P57678 1058 aaKnown RBP7.83□□□□□ -1.16
TCF4-216ENST00000562680 SP2Q02086 613 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 ADIGQ0VDE8 80 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 LCLAT1Q6UWP7 414 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 CCDC149Q6ZUS6 474 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 SPATA21Q7Z572 469 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 PXYLP1Q8TE99 480 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 FNIP1Q8TF40 1166 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 PCDH9Q9HC56 1237 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 TRPC7Q9HCX4 862 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 ABCC13Q9NSE7 274 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 TAF1P21675 1872 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 IGKV6D-21A0A0A0MT36 114 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 RBM47A0AV96 593 aaKnown RBP7.83□□□□□ -1.16
TCF4-216ENST00000562680 HACD1B0YJ81 288 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 COPEO14579 308 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 PEX10O60683 326 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 LAG3P18627 525 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 RASIP1Q5U651 963 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 WSCD1Q658N2 575 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 KCTD16Q68DU8 428 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 TMC7Q7Z402 723 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 HERC6Q8IVU3 1022 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 LNX1Q8TBB1 728 aaPredicted RBP7.83□□□□□ -1.16
TCF4-216ENST00000562680 SPPL2BQ8TCT7 592 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 BCAS4Q8TDM0 211 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 NXF3Q9H4D5 531 aaKnown RBP7.83□□□□□ -1.16
TCF4-216ENST00000562680 TSC22D4Q9Y3Q8 395 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 NEU2Q9Y3R4 380 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 TYMPP19971 482 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 HNRNPH1P31943 449 aaKnown RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 ZNF143P52747 638 aaPredicted RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 ST8SIA6P61647 398 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 PRAMEP78395 509 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 ORC1Q13415 861 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 MORF4L2Q15014 288 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 SLC44A4Q53GD3 710 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 C17orf99Q6UX52 265 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 KREMEN1Q96MU8 473 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 VAT1Q99536 393 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 RASSF10A6NK89 507 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 XPO1O14980 1071 aaKnown RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 CILPO75339 1184 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 GJB1P08034 283 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 VCPP55072 806 aaKnown RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 JAM2P57087 298 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 ZNF177Q13360 481 aaPredicted RBP7.82□□□□□ -1.16
TCF4-216ENST00000562680 USP41Q3LFD5 358 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 AGBL2Q5U5Z8 902 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 NUGGCQ68CJ6 796 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 VSTM1Q6UX27 236 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 B3GNT9Q6UX72 402 aa7.82□□□□□ -1.16
TCF4-216ENST00000562680 IFNLR1Q8IU57 520 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms