RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 TMPRSS9Q7Z410 1059 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 ZNF804AQ7Z570 1209 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 ERC1Q8IUD2 1116 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 CFAP52Q8N1V2 620 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 AOPEPQ8N6M6 819 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 OTUD7AQ8TE49 926 aaPredicted RBP5.47□□□□□ -1.53
SMG1-206ENST00000562668 KAT5Q92993 513 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 KIF1BPQ96EK5 621 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 ZBED3Q96IU2 234 aaPredicted RBP5.47□□□□□ -1.53
SMG1-206ENST00000562668 FAXDC2Q96IV6 333 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 CCDC8Q9H0W5 538 aaPredicted RBP5.47□□□□□ -1.53
SMG1-206ENST00000562668 CPNE5Q9HCH3 593 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 IL1RAPL2Q9NP60 686 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 HMG20BQ9P0W2 317 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 CDK5RAP2Q96SN8 1893 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 AOX1Q06278 1338 aa5.47□□□□□ -1.53
SMG1-206ENST00000562668 ADM5C9JUS6 153 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 E7ENX8 843 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 PCDHGA12O60330 932 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 CHRM2P08172 466 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 MYBL2P10244 700 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 RPS12P25398 132 aaKnown RBP5.46□□□□□ -1.54
SMG1-206ENST00000562668 ATXN1P54253 815 aaKnown RBP5.46□□□□□ -1.54
SMG1-206ENST00000562668 KRTAP10-11P60412 298 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 KRT85P78386 507 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 POU6F2P78424 691 aaPredicted RBP5.46□□□□□ -1.54
SMG1-206ENST00000562668 TAP2Q03519 686 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 HLXQ14774 488 aaPredicted RBP5.46□□□□□ -1.54
SMG1-206ENST00000562668 TNIP1Q15025 636 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 CAVIN4Q5BKX8 364 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 TSTD2Q5T7W7 516 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 TTLL5Q6EMB2 1281 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 TSHZ1Q6ZSZ6 1077 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 MICALCLQ6ZW33 695 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 AACSQ86V21 672 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 C16orf71Q8IYS4 520 aaPredicted RBP5.46□□□□□ -1.54
SMG1-206ENST00000562668 SH2D3CQ8N5H7 860 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 SLC17A8Q8NDX2 589 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 AGBL3Q8NEM8 1001 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 GCC1Q96CN9 775 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 CLPTM1LQ96KA5 538 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 TEKT5Q96M29 485 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 NEUROD6Q96NK8 337 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 LRRCC1Q9C099 1032 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 TAF1DQ9H5J8 278 aaPredicted RBP5.46□□□□□ -1.54
SMG1-206ENST00000562668 SPC25Q9HBM1 224 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 KMT5AQ9NQR1 393 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 PGAP2Q9UHJ9 254 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 TRHDEQ9UKU6 1024 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 ATP8A1Q9Y2Q0 1164 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 PCDHGA9Q9Y5G4 932 aaKnown RBP5.46□□□□□ -1.54
SMG1-206ENST00000562668 PCDHGA8Q9Y5G5 932 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 PCDHGA7Q9Y5G6 932 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 PCDHGA6Q9Y5G7 932 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 PCDHGA3Q9Y5H0 932 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 PCDHAC2Q9Y5I4 1007 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 MYH7P12883 1935 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 FOCADQ5VW36 1801 aa5.46□□□□□ -1.54
SMG1-206ENST00000562668 PAPPA2Q9BXP8 1791 aa5.45□□□□□ -1.54
SMG1-206ENST00000562668 MYH2Q9UKX2 1941 aa5.45□□□□□ -1.54
SMG1-206ENST00000562668 CENPBP07199 599 aaPredicted RBP5.45□□□□□ -1.54
SMG1-206ENST00000562668 VEGFAP15692 232 aaPredicted RBP5.45□□□□□ -1.54
SMG1-206ENST00000562668 NUCB1Q02818 461 aa5.45□□□□□ -1.54
SMG1-206ENST00000562668 OS9Q13438 667 aaPredicted RBP5.45□□□□□ -1.54
SMG1-206ENST00000562668 CLASRPQ8N2M8 674 aaKnown RBP5.45□□□□□ -1.54
SMG1-206ENST00000562668 SPATA5Q8NB90 893 aa5.45□□□□□ -1.54
SMG1-206ENST00000562668 B3GALNT2Q8NCR0 500 aa5.45□□□□□ -1.54
SMG1-206ENST00000562668 NSUN7Q8NE18 718 aaKnown RBP5.45□□□□□ -1.54
SMG1-206ENST00000562668 NSUN6Q8TEA1 469 aaKnown RBP5.45□□□□□ -1.54
SMG1-206ENST00000562668 COA7Q96BR5 231 aa5.45□□□□□ -1.54
SMG1-206ENST00000562668 SMOQ99835 787 aa5.45□□□□□ -1.54
SMG1-206ENST00000562668 RWDD1Q9H446 243 aaPredicted RBP5.45□□□□□ -1.54
SMG1-206ENST00000562668 CNOT7Q9UIV1 285 aaKnown RBP5.45□□□□□ -1.54
SMG1-206ENST00000562668 HACL1Q9UJ83 578 aa5.45□□□□□ -1.54
SMG1-206ENST00000562668 PCDHB1Q9Y5F3 818 aa5.45□□□□□ -1.54
SMG1-206ENST00000562668 MRFAP1Q9Y605 127 aa5.45□□□□□ -1.54
SMG1-206ENST00000562668 CFAP20Q9Y6A4 193 aaKnown RBP5.45□□□□□ -1.54
SMG1-206ENST00000562668 ASTN2O75129 1339 aaPredicted RBP5.45□□□□□ -1.54
SMG1-206ENST00000562668 MYO3BQ8WXR4 1341 aa5.45□□□□□ -1.54
SMG1-206ENST00000562668 RFX7Q2KHR2 1363 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 CGB1A6NKQ9 187 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 LINC00473A8K010 186 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 E9PLN8 166 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 RPLP2P05387 115 aaKnown RBP5.44□□□□□ -1.54
SMG1-206ENST00000562668 UQCRFS1P1P0C7P4 283 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 ELFN1P0C7U0 828 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 PRDX5P30044 214 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 EPHX2P34913 555 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 NPTX2P47972 431 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 SOX10P56693 466 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 NXPH1P58417 271 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 ITIH3Q06033 890 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 CHAF1AQ13111 956 aaPredicted RBP5.44□□□□□ -1.54
SMG1-206ENST00000562668 DDX60LQ5H9U9 1706 aaKnown RBP5.44□□□□□ -1.54
SMG1-206ENST00000562668 PAPD7Q5XG87 772 aaKnown RBP5.44□□□□□ -1.54
SMG1-206ENST00000562668 USP50Q70EL3 339 aaPredicted RBP5.44□□□□□ -1.54
SMG1-206ENST00000562668 GLCCI1Q86VQ1 547 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 ANKS1AQ92625 1134 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 NSUN4Q96CB9 384 aaKnown RBP5.44□□□□□ -1.54
SMG1-206ENST00000562668 LRIG1Q96JA1 1093 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms