RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 HEPHQ9BQS7 1158 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 CHST7Q9NS84 486 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 TRIM17Q9Y577 477 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 ARHGAP10A1A4S6 786 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 DENND3A2RUS2 1198 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 CLDN3O15551 220 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 XPOTO43592 962 aaKnown RBP13.82□□□□□ -0.2
CLK3-206ENST00000562078 ITGBL1O95965 494 aaPredicted RBP13.82□□□□□ -0.2
CLK3-206ENST00000562078 ADRB2P07550 413 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 PMLP29590 882 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 HOXD11P31277 338 aaPredicted RBP13.82□□□□□ -0.2
CLK3-206ENST00000562078 ADCY8P40145 1251 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 TMED10P49755 219 aaKnown RBP13.82□□□□□ -0.2
CLK3-206ENST00000562078 ARL4CP56559 192 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 FSTL1Q12841 308 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 GK3PQ14409 553 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 C1orf220Q5T0J3 134 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 CST9Q5W186 159 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 ZNF410Q86VK4 478 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 ZNF276Q8N554 614 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 PIP4K2CQ8TBX8 421 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 OXNAD1Q96HP4 312 aaPredicted RBP13.82□□□□□ -0.2
CLK3-206ENST00000562078 CDHR1Q96JP9 859 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 RBM15Q96T37 977 aaKnown RBP eCLIP13.82□□□□□ -0.23e-6■■■■□ 24.3
CLK3-206ENST00000562078 ARMC7Q9H6L4 198 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 LRRC19Q9H756 370 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 KMT5AQ9NQR1 393 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 APPL1Q9UKG1 709 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 TBX20Q9UMR3 447 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 NFASCO94856 1347 aa13.82□□□□□ -0.2
CLK3-206ENST00000562078 EIF3FO00303 357 aaPredicted RBP13.81□□□□□ -0.2
CLK3-206ENST00000562078 MATN2O00339 956 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 STBD1O95210 358 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 CYP2C8P10632 490 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 CDH2P19022 906 aaPredicted RBP13.81□□□□□ -0.2
CLK3-206ENST00000562078 RRM1P23921 792 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 SLC18A1P54219 525 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 TRIP10Q15642 601 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 MAP3K21Q5TCX8 1036 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 WDR78Q5VTH9 848 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 TMEM214Q6NUQ4 689 aaKnown RBP13.81□□□□□ -0.2
CLK3-206ENST00000562078 PACS1Q6VY07 963 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 CBWD2Q8IUF1 395 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 LMO3Q8TAP4 145 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 CASP10Q92851 521 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 ACP6Q9NPH0 428 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 TUBA8Q9NY65 449 aaPredicted RBP13.81□□□□□ -0.2
CLK3-206ENST00000562078 MTO1Q9Y2Z2 717 aaKnown RBP13.81□□□□□ -0.2
CLK3-206ENST00000562078 FUOMA2VDF0 154 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 CAPN8A6NHC0 703 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 SPATA31C2B4DYI2 1134 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 PDHXO00330 501 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 FKBP6O75344 327 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 CNMDO75829 334 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 DLDP09622 509 aaKnown RBP13.81□□□□□ -0.2
CLK3-206ENST00000562078 MYL2P10916 166 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 ATF2P15336 505 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 KRT4P19013 534 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 ADSSP30520 456 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 SP2Q02086 613 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 SGO2Q562F6 1265 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 SPRYD7Q5W111 196 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 C14orf80Q86SX3 495 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 MAP4K3Q8IVH8 894 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 ARHGEF19Q8IW93 802 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 SLC7A5P1Q8MH63 180 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 PPM1KQ8N3J5 372 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 C12orf50Q8NA57 414 aaPredicted RBP13.81□□□□□ -0.2
CLK3-206ENST00000562078 SLC26A7Q8TE54 656 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 MS4A4AQ96JQ5 239 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 BTBD6Q96KE9 485 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 TRAIPQ9BWF2 469 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 TXNRD2Q9NNW7 524 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 RBPJLQ9UBG7 517 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 SPO11Q9Y5K1 396 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 CEPT1Q9Y6K0 416 aa13.81□□□□□ -0.2
CLK3-206ENST00000562078 ANKRD62A6NC57 917 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 ADCY6O43306 1168 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 STAM2O75886 525 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 SNRNP35Q16560 246 aaKnown RBP13.8□□□□□ -0.2
CLK3-206ENST00000562078 GRAMD1BQ3KR37 738 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 IYDQ6PHW0 289 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 ELMSAN1Q6PJG2 1045 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 ADGRG6Q86SQ4 1221 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 CROCCP3Q8IVE0 287 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 ALDH16A1Q8IZ83 802 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 HIPK4Q8NE63 616 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 TMEM174Q8WUU8 243 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 BRI3BPQ8WY22 251 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 PRPF18Q99633 342 aaKnown RBP13.8□□□□□ -0.2
CLK3-206ENST00000562078 CCT7Q99832 543 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 TSSK1BQ9BXA7 367 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 MRPS26Q9BYN8 205 aaKnown RBP13.8□□□□□ -0.2
CLK3-206ENST00000562078 MANSC1Q9H8J5 431 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 TRPC7Q9HCX4 862 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 XPNPEP1Q9NQW7 623 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 EXOC7Q9UPT5 735 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 AK5Q9Y6K8 562 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 FAM237BA0A1B0GVD1 139 aa13.8□□□□□ -0.2
CLK3-206ENST00000562078 MEI4A8MW99 385 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms