RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	FRMD4B	Q9Y2L6	1034 aa		7.85	□□□□□ -1.15
ZEB1-223	ENST00000561304	CPQ	Q9Y646	472 aa		7.85	□□□□□ -1.15
ZEB1-223	ENST00000561304	SDK1	Q7Z5N4	2213 aa		7.85	□□□□□ -1.15
ZEB1-223	ENST00000561304	ABCA7	Q8IZY2	2146 aa		7.85	□□□□□ -1.15
ZEB1-223	ENST00000561304	ADAMTS9	Q9P2N4	1935 aa		7.85	□□□□□ -1.15
ZEB1-223	ENST00000561304	HHLA1	C9JL84	531 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	IKBKB	O14920	756 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	COCH	O43405	550 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	ABL1	P00519	1130 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	CD58	P19256	250 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	TGM1	P22735	817 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	ADORA2B	P29275	332 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	OPRD1	P41143	372 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	IFNAR2	P48551	515 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	PXN	P49023	591 aa	Predicted RBP	7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	GALK1	P51570	392 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	MCCD1	P59942	119 aa	Predicted RBP	7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	SLC7A9	P82251	487 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	INCA1	Q0VD86	236 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	ADAM9	Q13443	819 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	PDGFRL	Q15198	375 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	SGSM1	Q2NKQ1	1148 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	CC2D1A	Q6P1N0	951 aa	Predicted RBP	7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	C1orf228	Q6PIY5	440 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	TREML4	Q6UXN2	200 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	CLEC20A	Q6ZU45	233 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	INTS8	Q75QN2	995 aa	Known RBP	7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	FILIP1	Q7Z7B0	1213 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	C12orf40	Q86WS4	652 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	ZC3H3	Q8IXZ2	948 aa	Known RBP	7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	NUP93	Q8N1F7	819 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	CPA6	Q8N4T0	437 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	SPATA20	Q8TB22	786 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	RUBCN	Q92622	972 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	TAF4B	Q92750	862 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	FBXO32	Q969P5	355 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	RMDN1	Q96DB5	314 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	ARID3A	Q99856	593 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	CCSER2	Q9H7U1	834 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	PRM3	Q9NNZ6	103 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	PARD6A	Q9NPB6	346 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	DMAP1	Q9NPF5	467 aa	Predicted RBP	7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	IL37	Q9NZH6	218 aa		7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	GMPR2	Q9P2T1	348 aa	Known RBP	7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	MUC22	E2RYF6	1773 aa	Predicted RBP	7.84	□□□□□ -1.15
ZEB1-223	ENST00000561304	FAM92A	A1XBS5	289 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	CYP26A1	O43174	497 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	KIF20A	O95235	890 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	CYP17A1	P05093	508 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	ZDHHC11B	P0C7U3	371 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	MBL2	P11226	248 aa	Predicted RBP	7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	YWHAQ	P27348	245 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	PSMC2	P35998	433 aa	Known RBP	7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	MAP3K7CL	P57077	242 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	DHX9	Q08211	1270 aa	Known RBP	7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	EDRF1	Q3B7T1	1238 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	CBWD6	Q4V339	395 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	CBWD3	Q5JTY5	395 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	CBWD5	Q5RIA9	395 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	CCDC116	Q8IYX3	515 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	CRYBG2	Q8N1P7	616 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	RPLP0P6	Q8NHW5	317 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	CD101	Q93033	1021 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	ATP2A3	Q93084	1043 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	CCDC47	Q96A33	483 aa	Known RBP	7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	JAKMIP2	Q96AA8	810 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	TNIP3	Q96KP6	325 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	SLITRK1	Q96PX8	696 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	HHIP	Q96QV1	700 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	KCTD15	Q96SI1	283 aa	Predicted RBP	7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	P2RY13	Q9BPV8	354 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	FAM126A	Q9BYI3	521 aa	Predicted RBP	7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	NIF3L1	Q9GZT8	377 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	TMEM8A	Q9HCN3	771 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	CSNK1G1	Q9HCP0	422 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	OSER1	Q9NX31	292 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	CFAP97	Q9P2B7	532 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	NCDN	Q9UBB6	729 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	CHORDC1	Q9UHD1	332 aa	Predicted RBP	7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	PCDHA5	Q9Y5H7	936 aa		7.84	□□□□□ -1.16
ZEB1-223	ENST00000561304	ATP8B3	O60423	1300 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	CACNA1A	O00555	2505 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	TP53BP1	Q12888	1972 aa	Predicted RBP	7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	WDFY3	Q8IZQ1	3526 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	GADD45B	O75293	160 aa	Predicted RBP	7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	CILP	O75339	1184 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	RTN3	O95197	1032 aa	Predicted RBP	7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	ZIC2	O95409	532 aa	Predicted RBP	7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	NFATC1	O95644	943 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	IRF1	P10914	325 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	KRT13	P13646	458 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	P4HA1	P13674	534 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	PFKL	P17858	780 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	BMP6	P22004	513 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	RPL13	P26373	211 aa	Known RBP	7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	SLC6A11	P48066	632 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	MXI1	P50539	228 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	PDE6C	P51160	858 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	NRL	P54845	237 aa		7.83	□□□□□ -1.16
ZEB1-223	ENST00000561304	ENPEP	Q07075	957 aa		7.83	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms