RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PDGFCQ9NRA1 345 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 DNAJC17Q9NVM6 304 aaKnown RBP14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 PLK2Q9NYY3 685 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 PSMC3IPQ9P2W1 217 aaPredicted RBP14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 NEU2Q9Y3R4 380 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 NUMBLQ9Y6R0 609 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 SCINQ9Y6U3 715 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 PSTPIP1O43586 416 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 GJB1P08034 283 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 GJA5P36382 358 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 ADARP55265 1226 aaKnown RBP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 IRX4P78413 519 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 DCTN2Q13561 401 aaKnown RBP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 TTLL4Q14679 1199 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 LLGL1Q15334 1064 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 TBCCQ15814 346 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 PKN2Q16513 984 aaKnown RBP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 ATF7IP2Q5U623 682 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 RIPOR1Q6ZS17 1223 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 RASSF3Q86WH2 238 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 SHCBP1Q8NEM2 672 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 ZC3H15Q8WU90 426 aaKnown RBP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 C9orf72Q96LT7 481 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 NLRP4Q96MN2 994 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 HERPUD2Q9BSE4 406 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 EBF3Q9H4W6 596 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 DCTN4Q9UJW0 460 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 MGAMO43451 1857 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 EVPLQ92817 2033 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 B4GALT5O43286 388 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 HNRNPCP07910 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 MMP8P22894 467 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 RPL5P46777 297 aaKnown RBP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 CD97P48960 835 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 CLCN3P51790 818 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 CHN2P52757 468 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 GEMIN4P57678 1058 aaKnown RBP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 TFAMQ00059 246 aaKnown RBP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 EEF1DP3Q658K8 133 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 EFCAB12Q6NXP0 572 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 CENPUQ71F23 418 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 FAM172AQ8WUF8 416 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 ZNF668Q96K58 619 aaPredicted RBP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 ZFRQ96KR1 1074 aaKnown RBP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 PRICKLE1Q96MT3 831 aaPredicted RBP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 BTBD9Q96Q07 612 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 RBM15Q96T37 977 aaKnown RBP eCLIP14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 TMEM120AQ9BXJ8 343 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 TMEM165Q9HC07 324 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 CISHQ9NSE2 258 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 PARVAQ9NVD7 372 aa14.51□□□□□ -0.09
RABGGTA-220ENST00000560998 A0A0G2JND7 137 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 ASB14A6NK59 587 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 INO80B-WBP1J3KQ70 363 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 B4GALT4O60513 344 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 LSM8O95777 96 aaKnown RBP14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 CD58P19256 250 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 EPHX2P34913 555 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 GRIA2P42262 883 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 MAGEA10P43363 369 aaPredicted RBP14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 PSMD7P51665 324 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 TAS2R40P59535 323 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 MBTD1Q05BQ5 628 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 TRPC3Q13507 836 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 OLFML2BQ68BL8 750 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 DHDDSQ86SQ9 333 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 SATL1Q86VE3 508 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 CHSY1Q86X52 802 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 MAP7D3Q8IWC1 876 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 RHOT1Q8IXI2 618 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 THNSL1Q8IYQ7 743 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 C4orf33Q8N1A6 199 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 FEZF2Q8TBJ5 459 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 NMD3Q96D46 503 aaKnown RBP14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 TSSK1BQ9BXA7 367 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 INO80BQ9C086 356 aaPredicted RBP14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 MANSC1Q9H8J5 431 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 CHST7Q9NS84 486 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 THEGQ9P2T0 379 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 ZNF148Q9UQR1 794 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 ZSWIM8A7E2V4 1837 aa14.5□□□□□ -0.09
RABGGTA-220ENST00000560998 TLR3O15455 904 aaKnown RBP14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 C22orf31O95567 290 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 TMEM191BP0C7N4 346 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 FGFR1P11362 822 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 ARHGAP1Q07960 439 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 KATNAL2Q8IYT4 538 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 OXNAD1Q96HP4 312 aaPredicted RBP14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 PANX3Q96QZ0 392 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 XYLT2Q9H1B5 865 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 C1orf21Q9H246 121 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 RNPEPQ9H4A4 650 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 MINDY3Q9H8M7 445 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 ARHGEF4Q9NR80 690 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 ERAP1Q9NZ08 941 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 PLA2G4CQ9UP65 541 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 DMTF1Q9Y222 760 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 TNFSF13BQ9Y275 285 aa14.49□□□□□ -0.09
RABGGTA-220ENST00000560998 PLXNA1Q9UIW2 1896 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms