RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ACOX2Q99424 681 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 DPEP3Q9H4B8 488 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 DNAJC17Q9NVM6 304 aaKnown RBP19.65■□□□□ 0.74
TPM1-226ENST00000560959 PCOLCE2Q9UKZ9 415 aa19.65■□□□□ 0.74
TPM1-226ENST00000560959 CLDN5O00501 218 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 TRIM24O15164 1050 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 GREM1O60565 184 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 CD6P30203 668 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 ATICP31939 592 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 GRIK2Q13002 908 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 DBX2Q6ZNG2 339 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 TMPRSS7Q7RTY8 843 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 SLCO6A1Q86UG4 719 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 KCNK16Q96T55 309 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 CCSER2Q9H7U1 834 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 PPP4R2Q9NY27 417 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 WSB2Q9NYS7 404 aaPredicted RBP19.64■□□□□ 0.73
TPM1-226ENST00000560959 HSPBP1Q9NZL4 362 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 FBXO2Q9UK22 296 aaPredicted RBP19.64■□□□□ 0.73
TPM1-226ENST00000560959 SMC3Q9UQE7 1217 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 ATP8B3O60423 1300 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 CEP192Q8TEP8 1941 aa19.64■□□□□ 0.73
TPM1-226ENST00000560959 CELSR3Q9NYQ7 3312 aa19.63■□□□□ 0.73
TPM1-226ENST00000560959 PRRT4C9JH25 899 aa19.63■□□□□ 0.73
TPM1-226ENST00000560959 NPC1O15118 1278 aa19.63■□□□□ 0.73
TPM1-226ENST00000560959 DKK1O94907 266 aa19.63■□□□□ 0.73
TPM1-226ENST00000560959 TYRP14679 529 aa19.63■□□□□ 0.73
TPM1-226ENST00000560959 TNNI1P19237 187 aa19.63■□□□□ 0.73
TPM1-226ENST00000560959 SLC5A3P53794 718 aa19.63■□□□□ 0.73
TPM1-226ENST00000560959 IL27RAQ6UWB1 636 aa19.63■□□□□ 0.73
TPM1-226ENST00000560959 CCDC65Q8IXS2 484 aa19.63■□□□□ 0.73
TPM1-226ENST00000560959 SCAMP5Q8TAC9 235 aa19.63■□□□□ 0.73
TPM1-226ENST00000560959 BBS2Q9BXC9 721 aa19.63■□□□□ 0.73
TPM1-226ENST00000560959 DMAP1Q9NPF5 467 aaPredicted RBP19.63■□□□□ 0.73
TPM1-226ENST00000560959 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.63■□□□□ 0.73
TPM1-226ENST00000560959 PCDHGB2Q9Y5G2 931 aa19.63■□□□□ 0.73
TPM1-226ENST00000560959 IGSF10Q6WRI0 2623 aa19.62■□□□□ 0.73
TPM1-226ENST00000560959 CISD3P0C7P0 127 aa19.62■□□□□ 0.73
TPM1-226ENST00000560959 PSMD6Q15008 389 aa19.62■□□□□ 0.73
TPM1-226ENST00000560959 SNRNP35Q16560 246 aaKnown RBP19.62■□□□□ 0.73
TPM1-226ENST00000560959 PAQR9Q6ZVX9 377 aa19.62■□□□□ 0.73
TPM1-226ENST00000560959 WBP2Q969T9 261 aa19.62■□□□□ 0.73
TPM1-226ENST00000560959 TNIP3Q96KP6 325 aa19.62■□□□□ 0.73
TPM1-226ENST00000560959 CGRRF1Q99675 332 aa19.62■□□□□ 0.73
TPM1-226ENST00000560959 KLF16Q9BXK1 252 aaPredicted RBP19.62■□□□□ 0.73
TPM1-226ENST00000560959 NACA2Q9H009 215 aa19.62■□□□□ 0.73
TPM1-226ENST00000560959 FBXO44Q9H4M3 255 aa19.62■□□□□ 0.73
TPM1-226ENST00000560959 VRTNQ9H8Y1 702 aa19.62■□□□□ 0.73
TPM1-226ENST00000560959 ITM2CQ9NQX7 267 aa19.62■□□□□ 0.73
TPM1-226ENST00000560959 USP36Q9P275 1121 aaKnown RBP19.62■□□□□ 0.73
TPM1-226ENST00000560959 FBXO10Q9UK96 956 aa19.62■□□□□ 0.73
TPM1-226ENST00000560959 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.62■□□□□ 0.73
TPM1-226ENST00000560959 NEDD8-MDP1E9PL57 170 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 TLR5O60602 858 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 CER1O95813 267 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 MAOBP27338 520 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 SNRPFP62306 86 aaKnown RBP19.61■□□□□ 0.73
TPM1-226ENST00000560959 GOLGA8FQ08AF8 430 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 GOLGA8DPQ0D2H9 430 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 FAM35AQ86V20 835 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 BAHD1Q8TBE0 780 aaPredicted RBP19.61■□□□□ 0.73
TPM1-226ENST00000560959 MDM1Q8TC05 714 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 HNRNPLLQ8WVV9 542 aaKnown RBP19.61■□□□□ 0.73
TPM1-226ENST00000560959 SYAP1Q96A49 352 aaPredicted RBP19.61■□□□□ 0.73
TPM1-226ENST00000560959 SMARCD1Q96GM5 515 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 CDC6Q99741 560 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 XYLT2Q9H1B5 865 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 TLR8Q9NR97 1041 aaKnown RBP19.61■□□□□ 0.73
TPM1-226ENST00000560959 GMIPQ9P107 970 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 RAXQ9Y2V3 346 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 CLIC4Q9Y696 253 aa19.61■□□□□ 0.73
TPM1-226ENST00000560959 MORC2Q9Y6X9 1032 aaPredicted RBP19.61■□□□□ 0.73
TPM1-226ENST00000560959 EIF3DO15371 548 aaKnown RBP eCLIP19.6■□□□□ 0.73
TPM1-226ENST00000560959 DLATP10515 647 aaKnown RBP19.6■□□□□ 0.73
TPM1-226ENST00000560959 OXTRP30559 389 aa19.6■□□□□ 0.73
TPM1-226ENST00000560959 HOXD13P35453 343 aa19.6■□□□□ 0.73
TPM1-226ENST00000560959 STAT6P42226 847 aa19.6■□□□□ 0.73
TPM1-226ENST00000560959 DGKGP49619 791 aa19.6■□□□□ 0.73
TPM1-226ENST00000560959 TRPC3Q13507 836 aa19.6■□□□□ 0.73
TPM1-226ENST00000560959 E2F5Q15329 346 aa19.6■□□□□ 0.73
TPM1-226ENST00000560959 TOE1Q96GM8 510 aaKnown RBP19.6■□□□□ 0.73
TPM1-226ENST00000560959 LRRC27Q9C0I9 530 aa19.6■□□□□ 0.73
TPM1-226ENST00000560959 CSNK1G1Q9HCP0 422 aa19.6■□□□□ 0.73
TPM1-226ENST00000560959 CYLDQ9NQC7 956 aa19.6■□□□□ 0.73
TPM1-226ENST00000560959 CACNA2D2Q9NY47 1150 aa19.6■□□□□ 0.73
TPM1-226ENST00000560959 LSM7Q9UK45 103 aaKnown RBP19.6■□□□□ 0.73
TPM1-226ENST00000560959 ACACAQ13085 2346 aa19.6■□□□□ 0.73
TPM1-226ENST00000560959 PLXNB3Q9ULL4 1909 aa19.6■□□□□ 0.73
TPM1-226ENST00000560959 METTL12A8MUP2 240 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 MEI4A8MW99 385 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 NEFLP07196 543 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 IRF1P10914 325 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 NCAM1P13591 858 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 ATP5C1P36542 298 aaKnown RBP19.59■□□□□ 0.73
TPM1-226ENST00000560959 MATKP42679 507 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 MYL6P60660 151 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 CYP24A1Q07973 514 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 ENPP2Q13822 863 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 STARD3Q14849 445 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 KLHDC10Q6PID8 442 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms