RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 LRRD1A4D1F6 860 aa23.33■■□□□ 1.32
SNX22-205ENST00000560945 C3orf70A6NLC5 250 aaPredicted RBP23.33■■□□□ 1.32
SNX22-205ENST00000560945 NCAM1P13591 858 aa23.33■■□□□ 1.32
SNX22-205ENST00000560945 KRT10P13645 584 aa23.33■■□□□ 1.32
SNX22-205ENST00000560945 MAGEA10P43363 369 aaPredicted RBP23.33■■□□□ 1.32
SNX22-205ENST00000560945 SMC1AQ14683 1233 aaKnown RBP23.33■■□□□ 1.32
SNX22-205ENST00000560945 SIX1Q15475 284 aaPredicted RBP23.33■■□□□ 1.32
SNX22-205ENST00000560945 CA9Q16790 459 aa23.33■■□□□ 1.32
SNX22-205ENST00000560945 SLC25A52Q3SY17 297 aa23.33■■□□□ 1.32
SNX22-205ENST00000560945 BSPRYQ5W0U4 402 aa23.33■■□□□ 1.32
SNX22-205ENST00000560945 POLNQ7Z5Q5 900 aa23.33■■□□□ 1.32
SNX22-205ENST00000560945 NUP93Q8N1F7 819 aa23.33■■□□□ 1.32
SNX22-205ENST00000560945 SCML4Q8N228 414 aa23.33■■□□□ 1.32
SNX22-205ENST00000560945 IRGQQ8WZA9 623 aa23.33■■□□□ 1.32
SNX22-205ENST00000560945 NT5C3BQ969T7 300 aa23.33■■□□□ 1.32
SNX22-205ENST00000560945 RPGRIP1Q96KN7 1286 aa23.33■■□□□ 1.32
SNX22-205ENST00000560945 CAPN9O14815 690 aa23.32■■□□□ 1.32
SNX22-205ENST00000560945 SART1O43290 800 aaKnown RBP23.32■■□□□ 1.32
SNX22-205ENST00000560945 ITIH3Q06033 890 aa23.32■■□□□ 1.32
SNX22-205ENST00000560945 ZC3H12AQ5D1E8 599 aaKnown RBP23.32■■□□□ 1.32
SNX22-205ENST00000560945 SPOCD1Q6ZMY3 1216 aa23.32■■□□□ 1.32
SNX22-205ENST00000560945 MMGT1Q8N4V1 131 aa23.32■■□□□ 1.32
SNX22-205ENST00000560945 KRT12Q99456 494 aa23.32■■□□□ 1.32
SNX22-205ENST00000560945 C17orf80Q9BSJ5 609 aa23.32■■□□□ 1.32
SNX22-205ENST00000560945 ALG13Q9NP73 1137 aaKnown RBP23.32■■□□□ 1.32
SNX22-205ENST00000560945 TMPRSS4Q9NRS4 437 aa23.32■■□□□ 1.32
SNX22-205ENST00000560945 OSER1Q9NX31 292 aa23.32■■□□□ 1.32
SNX22-205ENST00000560945 M0QYT0 321 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 PRPSAP2O60256 369 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 LILRB3O75022 631 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 CA8P35219 290 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 CTNNB1P35222 781 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 YWHAGP61981 247 aaKnown RBP eCLIP23.31■■□□□ 1.32
SNX22-205ENST00000560945 KRT17Q04695 432 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 SHHQ15465 462 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 BNIPLQ7Z465 357 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 FAM131BQ86XD5 332 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 RCOR2Q8IZ40 523 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 CCDC185Q8N715 623 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 HINFPQ9BQA5 517 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 LRRC1Q9BTT6 524 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 SNRNP25Q9BV90 132 aaKnown RBP23.31■■□□□ 1.32
SNX22-205ENST00000560945 DDX47Q9H0S4 455 aaKnown RBP23.31■■□□□ 1.32
SNX22-205ENST00000560945 ANKZF1Q9H8Y5 726 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 DDX56Q9NY93 547 aaKnown RBP23.31■■□□□ 1.32
SNX22-205ENST00000560945 COL4A4P53420 1690 aaPredicted RBP23.31■■□□□ 1.32
SNX22-205ENST00000560945 A0A1W2PQH9 124 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 LINC01553A4QN01 128 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 FSCN2O14926 492 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 ABLIM3O94929 683 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 KRT7P08729 469 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 SMARCB1Q12824 385 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 NME3Q13232 169 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 KAZNQ674X7 775 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 SLC7A14Q8TBB6 771 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 C2orf15Q8WU43 125 aaKnown RBP23.31■■□□□ 1.32
SNX22-205ENST00000560945 OSBPL8Q9BZF1 889 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 MRPL17Q9NRX2 175 aaKnown RBP23.31■■□□□ 1.32
SNX22-205ENST00000560945 NUDT5Q9UKK9 219 aa23.31■■□□□ 1.32
SNX22-205ENST00000560945 PLXNA4Q9HCM2 1894 aa23.3■■□□□ 1.32
SNX22-205ENST00000560945 KDELR1P24390 212 aa23.3■■□□□ 1.32
SNX22-205ENST00000560945 STRADAQ7RTN6 431 aa23.3■■□□□ 1.32
SNX22-205ENST00000560945 PRELID2Q8N945 189 aa23.3■■□□□ 1.32
SNX22-205ENST00000560945 HDAC7Q8WUI4 952 aa23.3■■□□□ 1.32
SNX22-205ENST00000560945 RBM41Q96IZ5 413 aaKnown RBP23.3■■□□□ 1.32
SNX22-205ENST00000560945 PIGVQ9NUD9 493 aa23.3■■□□□ 1.32
SNX22-205ENST00000560945 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.3■■□□□ 1.32
SNX22-205ENST00000560945 GMIPQ9P107 970 aa23.3■■□□□ 1.32
SNX22-205ENST00000560945 AFF4Q9UHB7 1163 aaKnown RBP23.3■■□□□ 1.32
SNX22-205ENST00000560945 MTUS1Q9ULD2 1270 aa23.3■■□□□ 1.32
SNX22-205ENST00000560945 CEP290O15078 2479 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 TEX28O15482 410 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 DNAJB1P25685 340 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 BMPR1AP36894 532 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 CDKN2BP42772 138 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 MMRN1Q13201 1228 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 DENND5BQ6ZUT9 1274 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 CMASQ8NFW8 434 aaPredicted RBP23.29■■□□□ 1.32
SNX22-205ENST00000560945 ZNF461Q8TAF7 563 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 FAM118BQ9BPY3 351 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 MTIF3Q9H2K0 278 aaKnown RBP23.29■■□□□ 1.32
SNX22-205ENST00000560945 IL37Q9NZH6 218 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 STAP1Q9ULZ2 295 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 SCML2Q9UQR0 700 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 R3HDM2Q9Y2K5 976 aaKnown RBP23.29■■□□□ 1.32
SNX22-205ENST00000560945 hCG_1818297A0A087WSY0 165 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 ENDOD1O94919 500 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 CTSAP10619 480 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 ARSEP51690 589 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 ERVFC1P60507 584 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 DEUP1Q05D60 604 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 KLF1Q13351 362 aaPredicted RBP23.29■■□□□ 1.32
SNX22-205ENST00000560945 RAB33AQ14088 237 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 TAC4Q86UU9 113 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 KCTD6Q8NC69 237 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 PNKPQ96T60 521 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 CYP4F11Q9HBI6 524 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 ANLNQ9NQW6 1124 aa23.29■■□□□ 1.32
SNX22-205ENST00000560945 CARNS1A5YM72 827 aa23.28■■□□□ 1.32
SNX22-205ENST00000560945 SLC38A8A6NNN8 435 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms