RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 R4GN57 208 aa13.63□□□□□ -0.23
CTDSPL2-209ENST00000560620 GTPBP10A4D1E9 387 aaKnown RBP13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 TRDMT1O14717 391 aaKnown RBP13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 CYP17A1P05093 508 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 HMBSP08397 361 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 DRD1P21728 446 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 PON1P27169 355 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 GNA15P30679 374 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 PLA2G4AP47712 749 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 APBA1Q02410 837 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 EFEMP1Q12805 493 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 CCINQ13939 588 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 DHCR24Q15392 516 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 ANO4Q32M45 955 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 TCP11X2Q5H9J9 407 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 TMEM196Q5HYL7 178 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 RAB41Q5JT25 222 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 NAIF1Q69YI7 327 aaPredicted RBP13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 SCD5Q86SK9 330 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 BBS7Q8IWZ6 715 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 RNF139Q8WU17 664 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 NDRG1Q92597 394 aaKnown RBP13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 GOLGA1Q92805 767 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 NKD2Q969F2 451 aaPredicted RBP13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 OTUB2Q96DC9 234 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 ZFRQ96KR1 1074 aaKnown RBP13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 KLF16Q9BXK1 252 aaPredicted RBP13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 ST7Q9NRC1 585 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 CLIC5Q9NZA1 410 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 STRIP2Q9ULQ0 834 aa13.62□□□□□ -0.23
CTDSPL2-209ENST00000560620 RNF40O75150 1001 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 EGFP01133 1207 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 ADH5P11766 374 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 EEF1GP26641 437 aaKnown RBP13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 NBL1P41271 181 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 RAPGEF1Q13905 1077 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 LY6G5CQ5SRR4 150 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 FSTL4Q6MZW2 842 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 PMF1Q6P1K2 205 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 KLHDC10Q6PID8 442 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 RBM43Q6ZSC3 357 aaKnown RBP13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 C11orf57Q6ZUT1 292 aaPredicted RBP13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 MAML2Q8IZL2 1156 aaPredicted RBP13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 SYNPOQ8N3V7 929 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 SPEM1Q8N4L4 309 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 KIAA1958Q8N8K9 716 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 ANKRD20A12PQ8NF67 263 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 ENOX1Q8TC92 643 aaKnown RBP13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 ATRIPQ8WXE1 791 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 MIS12Q9H081 205 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 FBRSL1Q9HCM7 1045 aaKnown RBP13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 TAB2Q9NYJ8 693 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 MARCH2Q9P0N8 246 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 CACNA1IQ9P0X4 2223 aa13.61□□□□□ -0.23
CTDSPL2-209ENST00000560620 SLC12A8A0AV02 714 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 GFRA3O60609 400 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 ATG13O75143 517 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 ZNF132P52740 706 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 NRLP54845 237 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 SEC13P55735 322 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 COG7P83436 770 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 SATB1Q01826 763 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 GAD2Q05329 585 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 GAS6Q14393 721 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 ZNF528Q3MIS6 628 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 MIIPQ5JXC2 388 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 PM20D1Q6GTS8 502 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 CAVIN1Q6NZI2 390 aaKnown RBP13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 RHBDF2Q6PJF5 856 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 TPGS1Q6ZTW0 290 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 NAT16Q8N8M0 369 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 SLC35F5Q8WV83 523 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 KCTD13Q8WZ19 329 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 EDEM1Q92611 657 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 WBP2Q969T9 261 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 ZSWIM1Q9BR11 485 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 VPS16Q9H269 839 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 ACP6Q9NPH0 428 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 CNGB3Q9NQW8 809 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 SPHK2Q9NRA0 654 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 OLA1Q9NTK5 396 aaKnown RBP13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 FANCLQ9NW38 375 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 DNAJC12Q9UKB3 198 aa13.6□□□□□ -0.23
CTDSPL2-209ENST00000560620 YJEFN3A6XGL0 299 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 E7ENQ6 273 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 NEDD8-MDP1E9PL57 170 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 CDK11BP21127 795 aaKnown RBP13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 SLC6A11P48066 632 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 MYL5Q02045 173 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 PTK2Q05397 1052 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 KDSRQ06136 332 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 FBXO43Q4G163 708 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 PKDCCQ504Y2 493 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 FKBP15Q5T1M5 1219 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 BSPRYQ5W0U4 402 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 HEATR6Q6AI08 1181 aaKnown RBP13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 DENND1BQ6P3S1 775 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 HTR3DQ70Z44 454 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 TMEM25Q86YD3 366 aa13.59□□□□□ -0.23
CTDSPL2-209ENST00000560620 RPLP0P6Q8NHW5 317 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms