RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 SEMG2Q02383 582 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 KCNC4Q03721 635 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 MESP2Q0VG99 397 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 CAMK2BQ13554 666 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 MORC3Q14149 939 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 HLA-BQ31612 363 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 ANO4Q32M45 955 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 INAVAQ3KP66 663 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 CFAP221Q4G0U5 840 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 RHBDF2Q6PJF5 856 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 DENND5BQ6ZUT9 1274 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 TMEM86AQ8N2M4 240 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 TERB1Q8NA31 727 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 MLKLQ8NB16 471 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 IPO4Q8TEX9 1081 aaKnown RBP9.88□□□□□ -0.83
SMAD3-215ENST00000560424 SCFD1Q8WVM8 642 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 SMARCE1Q969G3 411 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 FUBP3Q96I24 572 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMAD3-215ENST00000560424 C7orf25Q9BPX7 421 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 IL21RQ9HBE5 538 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 RMND1Q9NWS8 449 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 TOR4AQ9NXH8 423 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 CFAP97Q9P2B7 532 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 CPSF3Q9UKF6 684 aaKnown RBP9.88□□□□□ -0.83
SMAD3-215ENST00000560424 GTF3C4Q9UKN8 822 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMAD3-215ENST00000560424 FNDC3AQ9Y2H6 1198 aaKnown RBP9.88□□□□□ -0.83
SMAD3-215ENST00000560424 R3HCC1Q9Y3T6 440 aaKnown RBP9.88□□□□□ -0.83
SMAD3-215ENST00000560424 PCDHGB2Q9Y5G2 931 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 SCN1AP35498 2009 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 ANAPC1Q9H1A4 1944 aa9.88□□□□□ -0.83
SMAD3-215ENST00000560424 K7ENM7 598 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 TULP3O75386 442 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 ADRB2P07550 413 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 JUPP14923 745 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 SCP2P22307 547 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 PCSK1P29120 753 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 GRK6P43250 576 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 SLC7A9P82251 487 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 PNOCQ13519 176 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 STARD3Q14849 445 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 IQCB1Q15051 598 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 SMAD1Q15797 465 aaKnown RBP9.87□□□□□ -0.83
SMAD3-215ENST00000560424 ANO6Q4KMQ2 910 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 COBLL1Q53SF7 1204 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 LY6G5CQ5SRR4 150 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 DHRS13Q6UX07 377 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 TMPRSS12Q86WS5 348 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 PDCL2Q8N4E4 241 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 BAHD1Q8TBE0 780 aaPredicted RBP9.87□□□□□ -0.83
SMAD3-215ENST00000560424 LARP4BQ92615 738 aaKnown RBP9.87□□□□□ -0.83
SMAD3-215ENST00000560424 RAD54LQ92698 747 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 OTUB2Q96DC9 234 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 CDK5RAP3Q96JB5 506 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 PANK2Q9BZ23 570 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 TRIM9Q9C026 710 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 BLOC1S4Q9NUP1 217 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 MAGEC2Q9UBF1 373 aaPredicted RBP9.87□□□□□ -0.83
SMAD3-215ENST00000560424 DACH1Q9UI36 760 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 SH3BP1Q9Y3L3 701 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 NFE2L3Q9Y4A8 694 aa9.87□□□□□ -0.83
SMAD3-215ENST00000560424 MYO18AQ92614 2054 aaKnown RBP9.86□□□□□ -0.83
SMAD3-215ENST00000560424 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.86□□□□□ -0.83
SMAD3-215ENST00000560424 PVALEFA0A1B0GWK0 134 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 A0A1W2PQF6 199 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 ERVH48-1M5A8F1 160 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 IKBKBO14920 756 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 FAM189A1O60320 539 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 DKK1O94907 266 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 RHOBTB3O94955 611 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 PRR29P0C7W0 189 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 BMP6P22004 513 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 ERCC5P28715 1186 aaPredicted RBP9.86□□□□□ -0.83
SMAD3-215ENST00000560424 ABCD1P33897 745 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 PPP1R2P41236 205 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 MAGEA11P43364 429 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 LHX1P48742 406 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 ACOT2P49753 483 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 NCKAP1LP55160 1127 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 CXADRP78310 365 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 ZXDBP98169 803 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 TEAD4Q15561 434 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 DPCR1Q3MIW9 517 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 DCAF12L1Q5VU92 463 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 EGFLAMQ63HQ2 1017 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 GRAMD4Q6IC98 578 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 SV2BQ7L1I2 683 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 RASSF8Q8NHQ8 419 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 DNASE2BQ8WZ79 361 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 SNX19Q92543 992 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 TOE1Q96GM8 510 aaKnown RBP9.86□□□□□ -0.83
SMAD3-215ENST00000560424 SPATA17Q96L03 361 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 SLITRK1Q96PX8 696 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 XPO6Q96QU8 1125 aaKnown RBP9.86□□□□□ -0.83
SMAD3-215ENST00000560424 GPR174Q9BXC1 333 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 CBX8Q9HC52 389 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 KCND2Q9NZV8 630 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 FTSJ1Q9UET6 329 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 MAN1B1Q9UKM7 699 aa9.86□□□□□ -0.83
SMAD3-215ENST00000560424 L1RE1Q9UN81 338 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms