RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 GRIK1P39086 918 aa24.53■■□□□ 1.52
TM2D3-209ENST00000560013 PBX3P40426 434 aa24.53■■□□□ 1.52
TM2D3-209ENST00000560013 ATXN1P54253 815 aaKnown RBP24.53■■□□□ 1.52
TM2D3-209ENST00000560013 DPYSL3Q14195 570 aa24.53■■□□□ 1.52
TM2D3-209ENST00000560013 KRT81Q14533 505 aa24.53■■□□□ 1.52
TM2D3-209ENST00000560013 GLIPR1L2Q4G1C9 344 aa24.53■■□□□ 1.52
TM2D3-209ENST00000560013 SYPL2Q5VXT5 272 aa24.53■■□□□ 1.52
TM2D3-209ENST00000560013 ZNF280DQ6N043 979 aa24.53■■□□□ 1.52
TM2D3-209ENST00000560013 TRIM43Q96BQ3 446 aaPredicted RBP24.53■■□□□ 1.52
TM2D3-209ENST00000560013 FUBP3Q96I24 572 aaKnown RBP eCLIP24.53■■□□□ 1.521e-6■■■■□ 23.5
TM2D3-209ENST00000560013 CCDC114Q96M63 670 aa24.53■■□□□ 1.52
TM2D3-209ENST00000560013 CALCOCO1Q9P1Z2 691 aa24.53■■□□□ 1.52
TM2D3-209ENST00000560013 OR6C75A6NL08 312 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 KIAA0355O15063 1070 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 GAS8O95995 478 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 LTFP02788 710 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 FYNP06241 537 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 FAM153BP0C7A2 387 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 ALDH7A1P49419 539 aaKnown RBP24.52■■□□□ 1.52
TM2D3-209ENST00000560013 LMNB2Q03252 620 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 KRT17Q04695 432 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 FAM153CQ494X1 144 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 ZC3H12AQ5D1E8 599 aaKnown RBP24.52■■□□□ 1.52
TM2D3-209ENST00000560013 BNIPLQ7Z465 357 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 RFX6Q8HWS3 928 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 KRT222Q8N1A0 295 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 TTC13Q8NBP0 860 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 TOP1MTQ969P6 601 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 MAK16Q9BXY0 300 aaKnown RBP24.52■■□□□ 1.52
TM2D3-209ENST00000560013 GPATCH2LQ9NWQ4 482 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 ABI2Q9NYB9 513 aaPredicted RBP24.52■■□□□ 1.52
TM2D3-209ENST00000560013 FAM153AQ9UHL3 310 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 NAALADL1Q9UQQ1 740 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 SNX24Q9Y343 169 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 USP3Q9Y6I4 520 aa24.52■■□□□ 1.52
TM2D3-209ENST00000560013 BYSLQ13895 437 aaKnown RBP24.51■■□□□ 1.51
TM2D3-209ENST00000560013 BHLHA9Q7RTU4 235 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 TMEM173Q86WV6 379 aaPredicted RBP24.51■■□□□ 1.51
TM2D3-209ENST00000560013 VSIG1Q86XK7 387 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 B3GALT6Q96L58 329 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 NEUROG2Q9H2A3 272 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 DNPEPQ9ULA0 475 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 M0QYT0 321 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 HSPA1AP0DMV8 641 aaKnown RBP24.51■■□□□ 1.51
TM2D3-209ENST00000560013 HSPA1BP0DMV9 641 aaKnown RBP24.51■■□□□ 1.51
TM2D3-209ENST00000560013 CSF2RAP15509 400 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 RAG1P15918 1043 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 DYNLT1P63172 113 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 MMRN1Q13201 1228 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 FAM71BQ8TC56 605 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 FRMD8P1Q9BZ68 369 aaPredicted RBP24.51■■□□□ 1.51
TM2D3-209ENST00000560013 CWH43Q9H720 699 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 VIPAS39Q9H9C1 493 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 PCDH18Q9HCL0 1135 aa24.51■■□□□ 1.51
TM2D3-209ENST00000560013 DRG1Q9Y295 367 aaKnown RBP24.51■■□□□ 1.51
TM2D3-209ENST00000560013 NCAM1P13591 858 aa24.5■■□□□ 1.51
TM2D3-209ENST00000560013 GBP1P32455 592 aa24.5■■□□□ 1.51
TM2D3-209ENST00000560013 RPL21P46778 160 aaKnown RBP24.5■■□□□ 1.51
TM2D3-209ENST00000560013 PITX1P78337 314 aaPredicted RBP24.5■■□□□ 1.51
TM2D3-209ENST00000560013 PTK6Q13882 451 aa24.5■■□□□ 1.51
TM2D3-209ENST00000560013 CA9Q16790 459 aa24.5■■□□□ 1.51
TM2D3-209ENST00000560013 OTUD1Q5VV17 481 aaPredicted RBP24.5■■□□□ 1.51
TM2D3-209ENST00000560013 HAUS1Q96CS2 278 aa24.5■■□□□ 1.51
TM2D3-209ENST00000560013 RNF157Q96PX1 679 aa24.5■■□□□ 1.51
TM2D3-209ENST00000560013 RRN3Q9NYV6 651 aa24.5■■□□□ 1.51
TM2D3-209ENST00000560013 PCDHB5Q9Y5E4 795 aa24.5■■□□□ 1.51
TM2D3-209ENST00000560013 TNFRSF10BO14763 440 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 IL4RP24394 825 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 RDXP35241 583 aaKnown RBP24.49■■□□□ 1.51
TM2D3-209ENST00000560013 TFDP2Q14188 446 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 DPYSL2Q16555 572 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 VSTM1Q6UX27 236 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 CCDC185Q8N715 623 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 BCL7CQ8WUZ0 217 aaPredicted RBP24.49■■□□□ 1.51
TM2D3-209ENST00000560013 AP4E1Q9UPM8 1137 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 ZNF148Q9UQR1 794 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 H7C4K7 107 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 APOC4-APOC2K7ER74 178 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 APOC2P02655 101 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 AMHP03971 560 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 VCPP55072 806 aaKnown RBP24.49■■□□□ 1.51
TM2D3-209ENST00000560013 OTUD4Q01804 1114 aaKnown RBP24.49■■□□□ 1.51
TM2D3-209ENST00000560013 DEUP1Q05D60 604 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 RTP2Q5QGT7 225 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 MFSD5Q6N075 450 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 ANKS3Q6ZW76 656 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 FAM131BQ86XD5 332 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 SCN4BQ8IWT1 228 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 TMEM199Q8N511 208 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 SCAMP5Q8TAC9 235 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 ACTL9Q8TC94 416 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 NKD2Q969F2 451 aaPredicted RBP24.49■■□□□ 1.51
TM2D3-209ENST00000560013 ZNF670Q9BS34 389 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 TTPALQ9BTX7 342 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 DHX35Q9H5Z1 703 aaKnown RBP24.49■■□□□ 1.51
TM2D3-209ENST00000560013 GRHL1Q9NZI5 618 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 SAE1Q9UBE0 346 aaPredicted RBP24.49■■□□□ 1.51
TM2D3-209ENST00000560013 NEU2Q9Y3R4 380 aa24.49■■□□□ 1.51
TM2D3-209ENST00000560013 COL4A6Q14031 1691 aa24.48■■□□□ 1.51
TM2D3-209ENST00000560013 ZNF487B1APH4 448 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms