RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 ARL14EPQ8N8R7 260 aaPredicted RBP21.75■■□□□ 1.07
PSEN1-225ENST00000560005 ZNF397Q8NF99 534 aaPredicted RBP21.75■■□□□ 1.07
PSEN1-225ENST00000560005 OLIG1Q8TAK6 271 aa21.75■■□□□ 1.07
PSEN1-225ENST00000560005 SH3RF2Q8TEC5 729 aa21.75■■□□□ 1.07
PSEN1-225ENST00000560005 POMGNT1Q8WZA1 660 aa21.75■■□□□ 1.07
PSEN1-225ENST00000560005 TRMT2BQ96GJ1 504 aaKnown RBP21.75■■□□□ 1.07
PSEN1-225ENST00000560005 PANX2Q96RD6 677 aa21.75■■□□□ 1.07
PSEN1-225ENST00000560005 FNBP1Q96RU3 617 aa21.75■■□□□ 1.07
PSEN1-225ENST00000560005 ASB7Q9H672 318 aa21.75■■□□□ 1.07
PSEN1-225ENST00000560005 GCN1Q92616 2671 aaKnown RBP21.75■■□□□ 1.07
PSEN1-225ENST00000560005 KPNA7A9QM74 516 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 ESPNB1AK53 854 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 TAF4O00268 1085 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 TNFRSF10BO14763 440 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 MAP3K13O43283 966 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 NFATC1O95644 943 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 CYP2F1P24903 491 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 CASP4P49662 377 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 RPL10AP62906 217 aaKnown RBP21.74■■□□□ 1.07
PSEN1-225ENST00000560005 CETN1Q12798 172 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 SYCP1Q15431 976 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 TMEM92Q6UXU6 159 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 PIP4P1Q86T03 277 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 SYT12Q8IV01 421 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 FRMD1Q8N878 549 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 CACTINQ8WUQ7 758 aaKnown RBP21.74■■□□□ 1.07
PSEN1-225ENST00000560005 MYRFLQ96LU7 910 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 NAA15Q9BXJ9 866 aaKnown RBP21.74■■□□□ 1.07
PSEN1-225ENST00000560005 LUC7L2Q9Y383 392 aaKnown RBP21.74■■□□□ 1.07
PSEN1-225ENST00000560005 PI4KAP42356 2102 aa21.74■■□□□ 1.07
PSEN1-225ENST00000560005 ATXN2Q99700 1313 aaKnown RBP21.74■■□□□ 1.07
PSEN1-225ENST00000560005 TNRC6BQ9UPQ9 1833 aaKnown RBP21.73■■□□□ 1.07
PSEN1-225ENST00000560005 A0A1W2PQJ5 194 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 C2orf78A6NCI8 922 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 P4HA2O15460 535 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 ALDH1A2O94788 518 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 TRIM21P19474 475 aaKnown RBP21.73■■□□□ 1.07
PSEN1-225ENST00000560005 P2RY2P41231 377 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 SEMA3BQ13214 749 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 SV2CQ496J9 727 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 TCERG1LQ5VWI1 586 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 GPD1LQ8N335 351 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 SPACA7Q96KW9 195 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 CBWD1Q9BRT8 395 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 PCIF1Q9H4Z3 704 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 GCNT4Q9P109 453 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 CAPN11Q9UMQ6 739 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 DAAM1Q9Y4D1 1078 aa21.73■■□□□ 1.07
PSEN1-225ENST00000560005 ANKRD63C9JTQ0 380 aa21.72■■□□□ 1.07
PSEN1-225ENST00000560005 ACAT1P24752 427 aaKnown RBP21.72■■□□□ 1.07
PSEN1-225ENST00000560005 GAB4Q2WGN9 574 aa21.72■■□□□ 1.07
PSEN1-225ENST00000560005 SLC23A3Q6PIS1 610 aa21.72■■□□□ 1.07
PSEN1-225ENST00000560005 ALLCQ8N6M5 410 aa21.72■■□□□ 1.07
PSEN1-225ENST00000560005 NEK11Q8NG66 645 aa21.72■■□□□ 1.07
PSEN1-225ENST00000560005 TMC2Q8TDI7 906 aa21.72■■□□□ 1.07
PSEN1-225ENST00000560005 WHAMMQ8TF30 809 aa21.72■■□□□ 1.07
PSEN1-225ENST00000560005 SLC35C1Q96A29 364 aa21.72■■□□□ 1.07
PSEN1-225ENST00000560005 NUCKS1Q9H1E3 243 aaKnown RBP21.72■■□□□ 1.07
PSEN1-225ENST00000560005 ABCB6Q9NP58 842 aa21.72■■□□□ 1.07
PSEN1-225ENST00000560005 FSCN3Q9NQT6 498 aa21.72■■□□□ 1.07
PSEN1-225ENST00000560005 MBD1Q9UIS9 605 aaPredicted RBP21.72■■□□□ 1.07
PSEN1-225ENST00000560005 IGSF10Q6WRI0 2623 aa21.72■■□□□ 1.07
PSEN1-225ENST00000560005 ZNF233A6NK53 670 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 TISP43B9A030 160 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 PMM2O15305 246 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 SKILP12757 684 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 HDCP19113 662 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 ADSSP30520 456 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 VAMP7P51809 220 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 MRPS21P82921 87 aaKnown RBP21.71■■□□□ 1.07
PSEN1-225ENST00000560005 CCDC142Q17RM4 750 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 DCAF17Q5H9S7 520 aaPredicted RBP21.71■■□□□ 1.07
PSEN1-225ENST00000560005 LYSMD4Q5XG99 296 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 GBP6Q6ZN66 633 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 PROSER1Q86XN7 944 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 SFTPA1Q8IWL2 248 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 PDCL2Q8N4E4 241 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 CHCHD4Q8N4Q1 142 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 TXNDC5Q8NBS9 432 aaKnown RBP21.71■■□□□ 1.07
PSEN1-225ENST00000560005 ZNF560Q96MR9 790 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 GTPBP2Q9BX10 602 aaKnown RBP21.71■■□□□ 1.07
PSEN1-225ENST00000560005 MMRN2Q9H8L6 949 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 DDX43Q9NXZ2 648 aaKnown RBP21.71■■□□□ 1.07
PSEN1-225ENST00000560005 ARHGAP26Q9UNA1 814 aa21.71■■□□□ 1.07
PSEN1-225ENST00000560005 SETXQ7Z333 2677 aaKnown RBP21.71■■□□□ 1.07
PSEN1-225ENST00000560005 ANAPC1Q9H1A4 1944 aa21.7■■□□□ 1.07
PSEN1-225ENST00000560005 UPK3BL1B0FP48 263 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 UPK3BL2E5RIL1 263 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 H0Y626 953 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 SGK1O00141 431 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 MFAP3LO75121 409 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 TRIM16O95361 564 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 CFIP05156 583 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 TCF3P15923 654 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 CASP14P31944 242 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 GTF2H1P32780 548 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 ATXN3P54252 364 aaPredicted RBP21.7■■□□□ 1.06
PSEN1-225ENST00000560005 FAM193AP78312 1265 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 ZBED6P86452 979 aa21.7■■□□□ 1.06
PSEN1-225ENST00000560005 SNRNP35Q16560 246 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms