RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 GABBR2O75899 941 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 ZBED1O96006 694 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 RPLP2P05387 115 aaKnown RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 ZNF865P0CJ78 1059 aaPredicted RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 HSPA1AP0DMV8 641 aaKnown RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 HSPA1BP0DMV9 641 aaKnown RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 TPSB2P20231 275 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 CA4P22748 312 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 IL4RP24394 825 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 L1CAMP32004 1257 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 GNL1P36915 607 aaPredicted RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 SKIV2L2P42285 1042 aaKnown RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 MSH2P43246 934 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 VEGFBP49765 207 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 HDAC4P56524 1084 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 BASP1P80723 227 aaKnown RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 CDK16Q00536 496 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 TPSAB1Q15661 275 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 GALNTL6Q49A17 601 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 MSS51Q4VC12 460 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 SLC45A4Q5BKX6 768 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 UBXN11Q5T124 520 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 COL13A1Q5TAT6 717 aaPredicted RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 SH3PXD2AQ5TCZ1 1133 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 NPNTQ6UXI9 565 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 C3orf62Q6ZUJ4 267 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 ANKMY2Q8IV38 441 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 TMEM130Q8N3G9 435 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 PQLC3Q8N755 202 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 C12orf29Q8N999 325 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 APPL2Q8NEU8 664 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 GDAP1Q8TB36 358 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 ZNF398Q8TD17 642 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 FBF1Q8TES7 1133 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 MZB1Q8WU39 189 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 DCAKDQ8WVC6 231 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 KCTD13Q8WZ19 329 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 C18orf25Q96B23 403 aaPredicted RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 PIWIL1Q96J94 861 aaKnown RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 QKIQ96PU8 341 aaKnown RBP eCLIP8.41□□□□□ -1.063e-6■■□□□ 13.7
SMAD3-212ENST00000559937 PAFAH2Q99487 392 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 HNRNPABQ99729 332 aaKnown RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 PTPN18Q99952 460 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 AP5M1Q9H0R1 490 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 NXF3Q9H4D5 531 aaKnown RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 NRDE2Q9H7Z3 1164 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 ZNF408Q9H9D4 720 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 CDHR5Q9HBB8 845 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 SLC40A1Q9NP59 571 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 FAM49BQ9NUQ9 324 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 KLHL14Q9P2G3 628 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 SAE1Q9UBE0 346 aaPredicted RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 ZNF180Q9UJW8 692 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 PIN4Q9Y237 131 aaKnown RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 NME7Q9Y5B8 376 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 PTPRDP23468 1912 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 MANSC4A6NHS7 340 aaPredicted RBP8.4□□□□□ -1.06
SMAD3-212ENST00000559937 GOLGA8MH3BSY2 632 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 KCNN4O15554 427 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 EDF1O60869 148 aaKnown RBP8.4□□□□□ -1.06
SMAD3-212ENST00000559937 GCATO75600 419 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 GRAP2O75791 330 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 IGHA2P01877 340 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 CYP2F1P24903 491 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 SSTR1P30872 391 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 FDFT1P37268 417 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 RGS2P41220 211 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 ELK3P41970 407 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 MATKP42679 507 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 MAGEA3P43357 314 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 PSMC4P43686 418 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 AIF1P55008 147 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 SLC8A3P57103 927 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 YWHAZP63104 245 aaKnown RBP8.4□□□□□ -1.06
SMAD3-212ENST00000559937 ZNF200P98182 395 aaPredicted RBP8.4□□□□□ -1.06
SMAD3-212ENST00000559937 ATP11AP98196 1134 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 PPARDQ03181 441 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 SLC18A2Q05940 514 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 CDO1Q16878 200 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 DEFB115Q30KQ5 88 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 SPDYAQ5MJ70 313 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 HHATQ5VTY9 493 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 CST9Q5W186 159 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 TAF2Q6P1X5 1199 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 SCYL2Q6P3W7 929 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 BNIPLQ7Z465 357 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 ZC3H18Q86VM9 953 aaKnown RBP8.4□□□□□ -1.06
SMAD3-212ENST00000559937 SCUBE3Q8IX30 993 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 HACE1Q8IYU2 909 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 ADGRF2Q8IZF7 708 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 LRRC8CQ8TDW0 803 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 DNAJB3Q8WWF6 145 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 SLC44A1Q8WWI5 657 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 WDR83Q9BRX9 315 aaKnown RBP8.4□□□□□ -1.06
SMAD3-212ENST00000559937 RXFP1Q9HBX9 757 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 XAB2Q9HCS7 855 aaKnown RBP8.4□□□□□ -1.06
SMAD3-212ENST00000559937 MKS1Q9NXB0 559 aa8.4□□□□□ -1.06
SMAD3-212ENST00000559937 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.4□□□□□ -1.061e-8■□□□□ 10.9
SMAD3-212ENST00000559937 AP4E1Q9UPM8 1137 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms