RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ASIC5Q9NY37 505 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 ELOVL5Q9NYP7 299 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 KLHL13Q9P2N7 655 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 PI4KBQ9UBF8 816 aa4.47□□□□□ -1.69
SPG11-218ENST00000559754 NKX1-2Q9UD57 310 aaPredicted RBP4.47□□□□□ -1.69
SPG11-218ENST00000559754 IFRD1O00458 451 aaPredicted RBP4.46□□□□□ -1.7
SPG11-218ENST00000559754 GOLIM4O00461 696 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 SH3BP5O60239 455 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 ZBED1O96006 694 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 HRGP04196 525 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 MYF5P13349 255 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 TPH1P17752 444 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 RPL17P18621 184 aaKnown RBP4.46□□□□□ -1.7
SPG11-218ENST00000559754 PAX3P23760 479 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 DIO1P49895 249 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 GATMP50440 423 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 CCT4P50991 539 aaKnown RBP4.46□□□□□ -1.7
SPG11-218ENST00000559754 RPS16P62249 146 aaKnown RBP4.46□□□□□ -1.7
SPG11-218ENST00000559754 FAM193AP78312 1265 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 FMO1Q01740 532 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 DHX8Q14562 1220 aaKnown RBP4.46□□□□□ -1.7
SPG11-218ENST00000559754 LARS2Q15031 903 aaKnown RBP4.46□□□□□ -1.7
SPG11-218ENST00000559754 NPY5RQ15761 445 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 ST3GAL2Q16842 350 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 GFOD2Q3B7J2 385 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 C3orf38Q5JPI3 329 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 SYCP2LQ5T4T6 812 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 ANO7Q6IWH7 933 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 MZT2AQ6P582 158 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 VSTM1Q6UX27 236 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 KCTD20Q7Z5Y7 419 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 C9orf106Q8NAJ2 232 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 ZNF398Q8TD17 642 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 PNISRQ8TF01 805 aaKnown RBP4.46□□□□□ -1.7
SPG11-218ENST00000559754 UBE2Q2Q8WVN8 375 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 HS6ST2Q96MM7 605 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 MAF1Q9H063 256 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 ZNF287Q9HBT7 754 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 GAR1Q9NY12 217 aaKnown RBP4.46□□□□□ -1.7
SPG11-218ENST00000559754 COL20A1Q9P218 1284 aa4.46□□□□□ -1.7
SPG11-218ENST00000559754 A8MVJ9 347 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 H3BNC9 293 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 RAB27BO00194 218 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 EXOC5O00471 708 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 FCHO1O14526 889 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 SPRY2O43597 315 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 SNX2O60749 519 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 FGBP02675 491 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 ITGA8P53708 1063 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 CFHR3Q02985 330 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 ZRSR2Q15696 482 aaKnown RBP4.45□□□□□ -1.7
SPG11-218ENST00000559754 KIAA0753Q2KHM9 967 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 Q4G0T1 1027 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 DCDC5Q6ZRR9 648 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 CHST15Q7LFX5 561 aaPredicted RBP4.45□□□□□ -1.7
SPG11-218ENST00000559754 C11orf96Q7Z7L8 435 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 C16orf71Q8IYS4 520 aaPredicted RBP4.45□□□□□ -1.7
SPG11-218ENST00000559754 SDR16C5Q8N3Y7 309 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 LINC01465Q8N7H1 131 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 NANOGP1Q8N7R0 232 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 OSR1Q8TAX0 266 aaPredicted RBP4.45□□□□□ -1.7
SPG11-218ENST00000559754 ZBTB45Q96K62 511 aaPredicted RBP4.45□□□□□ -1.7
SPG11-218ENST00000559754 MSLNLQ96KJ4 702 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 CHST8Q9H2A9 424 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 CHST12Q9NRB3 414 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 TRNAU1APQ9NX07 287 aaKnown RBP4.45□□□□□ -1.7
SPG11-218ENST00000559754 STEAP1Q9UHE8 339 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 MID2Q9UJV3 735 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 ITGB1BP2Q9UKP3 347 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 FER1L4A9Z1Z3 1794 aa4.45□□□□□ -1.7
SPG11-218ENST00000559754 SOCS2O14508 198 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 APEHP13798 732 aaKnown RBP4.44□□□□□ -1.7
SPG11-218ENST00000559754 HGFP14210 728 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 NR4A2P43354 598 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 STK3Q13188 491 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 KCNB1Q14721 858 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 RABEP1Q15276 862 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 DGKHQ86XP1 1220 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 FAM156AQ8NDB6 213 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 C16orf52Q8NHV5 167 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 MAFAQ8NHW3 353 aaPredicted RBP4.44□□□□□ -1.7
SPG11-218ENST00000559754 ZBTB9Q96C00 473 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 VPS50Q96JG6 964 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 SPRTNQ9H040 489 aaPredicted RBP4.44□□□□□ -1.7
SPG11-218ENST00000559754 BCCIPQ9P287 314 aaKnown RBP eCLIP4.44□□□□□ -1.7
SPG11-218ENST00000559754 DNAJB11Q9UBS4 358 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 DKK4Q9UBT3 224 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 LPAR3Q9UBY5 353 aa4.44□□□□□ -1.7
SPG11-218ENST00000559754 A6NNZ2 444 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 TPP1O14773 563 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 PARP1P09874 1014 aaKnown RBP4.43□□□□□ -1.7
SPG11-218ENST00000559754 TMEM191BP0C7N4 346 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 BTF3P20290 206 aaKnown RBP4.43□□□□□ -1.7
SPG11-218ENST00000559754 ADRA1DP25100 572 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 PEX2P28328 305 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 CARSP49589 748 aaKnown RBP4.43□□□□□ -1.7
SPG11-218ENST00000559754 MORC3Q14149 939 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 GBX1Q14549 363 aa4.43□□□□□ -1.7
SPG11-218ENST00000559754 CLCA4Q14CN2 919 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms