RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 ZNF782Q6ZMW2 699 aaPredicted RBP3.94□□□□□ -1.78
CASC4-210ENST00000559550 KIAA0408Q6ZU52 694 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 PTCHD4Q6ZW05 846 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 BEND5Q7L4P6 421 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 BCDIN3DQ7Z5W3 292 aaKnown RBP3.94□□□□□ -1.78
CASC4-210ENST00000559550 DPP9Q86TI2 863 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 RAB11FIP4Q86YS3 637 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 CCDC28AQ8IWP9 274 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 CCDC146Q8IYE0 955 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 GLIS1Q8NBF1 620 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 HASPINQ8TF76 798 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 KIAA1191Q96A73 305 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 ZDHHC12Q96GR4 267 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 ZNF668Q96K58 619 aaPredicted RBP3.94□□□□□ -1.78
CASC4-210ENST00000559550 SGCZQ96LD1 299 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 MMS19Q96T76 1030 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 MAGEB5Q9BZ81 275 aa3.94□□□□□ -1.78
CASC4-210ENST00000559550 COL15A1P39059 1388 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 TCRBV5S1A1TA0A578 114 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 CGB1A6NKQ9 187 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 SNX2O60749 519 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 MYCLP12524 364 aaPredicted RBP3.93□□□□□ -1.78
CASC4-210ENST00000559550 MST1P26927 711 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 RENBPP51606 427 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 MTAPQ13126 283 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 SYCP2LQ5T4T6 812 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 IZUMO3Q5VZ72 239 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 ABLIM2Q6H8Q1 611 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 GRHL2Q6ISB3 625 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 XRRA1Q6P2D8 792 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 ZNF66Q6ZN08 573 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 SRLQ86TD4 932 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 CHSY1Q86X52 802 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 SFTPA1Q8IWL2 248 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 TXLNBQ8N3L3 684 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 SVIPQ8NHG7 77 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 MBD3L2Q8NHZ7 208 aaPredicted RBP3.93□□□□□ -1.78
CASC4-210ENST00000559550 DDB2Q92466 427 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 DAZAP1Q96EP5 407 aaKnown RBP3.93□□□□□ -1.78
CASC4-210ENST00000559550 SNX18Q96RF0 628 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 CERS4Q9HA82 394 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 MGAT4CQ9UBM8 478 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 ZMYND8Q9ULU4 1186 aaPredicted RBP3.93□□□□□ -1.78
CASC4-210ENST00000559550 PCDHGB2Q9Y5G2 931 aa3.93□□□□□ -1.78
CASC4-210ENST00000559550 FAM234BA2RU67 622 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 LINC01548A6NM66 108 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 M0R3H8 397 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 CA12O43570 354 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 CBFA2T3O75081 653 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 PRKCGP05129 697 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 APEHP13798 732 aaKnown RBP3.92□□□□□ -1.78
CASC4-210ENST00000559550 PECAM1P16284 738 aaPredicted RBP3.92□□□□□ -1.78
CASC4-210ENST00000559550 SERPINB3P29508 390 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 HSPA7P48741 367 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 COPB1P53618 953 aaKnown RBP3.92□□□□□ -1.78
CASC4-210ENST00000559550 EIF4A1P60842 406 aaKnown RBP3.92□□□□□ -1.78
CASC4-210ENST00000559550 MPEG1Q2M385 716 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 ARHGAP15Q53QZ3 475 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 AWAT1Q58HT5 328 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 FAXCQ5TGI0 409 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 PRAMEF17Q5VTA0 474 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 SUMO4Q6EEV6 95 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 NOL8Q76FK4 1167 aaKnown RBP3.92□□□□□ -1.78
CASC4-210ENST00000559550 SKAP1Q86WV1 359 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 Q8N9P0 234 aaPredicted RBP3.92□□□□□ -1.78
CASC4-210ENST00000559550 PNLDC1Q8NA58 520 aaKnown RBP3.92□□□□□ -1.78
CASC4-210ENST00000559550 SEMA6DQ8NFY4 1073 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 BRI3BPQ8WY22 251 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 C18orf8Q96DM3 657 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 PRR11Q96HE9 360 aaPredicted RBP3.92□□□□□ -1.78
CASC4-210ENST00000559550 RITA1Q96K30 269 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 MYD88Q99836 296 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 PCDHAC1Q9H158 963 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 ZBTB26Q9HCK0 441 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 TRIM36Q9NQ86 728 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 NKX1-2Q9UD57 310 aaPredicted RBP3.92□□□□□ -1.78
CASC4-210ENST00000559550 STEAP1Q9UHE8 339 aa3.92□□□□□ -1.78
CASC4-210ENST00000559550 A8MVJ9 347 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 PRRT4C9JH25 899 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 H7C1Q1 480 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 TMPRSS11DO60235 418 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 LATS1O95835 1130 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 CD19P15391 556 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 ABCB4P21439 1286 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 EEF1GP26641 437 aaKnown RBP3.91□□□□□ -1.78
CASC4-210ENST00000559550 PBX1P40424 430 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 GPS1Q13098 491 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 CLCA4Q14CN2 919 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 ACOX1Q15067 660 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.91□□□□□ -1.78
CASC4-210ENST00000559550 MRNIPQ6NTE8 343 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 FSTL5Q8N475 847 aaPredicted RBP3.91□□□□□ -1.78
CASC4-210ENST00000559550 LINC01465Q8N7H1 131 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 CCDC150Q8NCX0 1101 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 SUN3Q8TAQ9 357 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 GJA10Q969M2 543 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 ZNF566Q969W8 418 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 EDC3Q96F86 508 aaKnown RBP3.91□□□□□ -1.78
CASC4-210ENST00000559550 SNX27Q96L92 541 aa3.91□□□□□ -1.78
CASC4-210ENST00000559550 WDR24Q96S15 920 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms