RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 SCD5Q86SK9 330 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 BBS7Q8IWZ6 715 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 ADGRG2Q8IZP9 1017 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 ARHGAP18Q8N392 663 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 RBBP8NLQ8NC74 664 aaPredicted RBP13.24□□□□□ -0.29
LRRC28-214ENST00000559433 ZBTB44Q8NCP5 570 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 UBA3Q8TBC4 463 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 NELL1Q92832 810 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 OTUB2Q96DC9 234 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 KLF16Q9BXK1 252 aaPredicted RBP13.24□□□□□ -0.29
LRRC28-214ENST00000559433 C2orf42Q9NWW7 574 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 DACH1Q9UI36 760 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 DNMT3LQ9UJW3 386 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 LSM7Q9UK45 103 aaKnown RBP13.24□□□□□ -0.29
LRRC28-214ENST00000559433 NUDT5Q9UKK9 219 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 FAM186AA6NE01 2351 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 CFAP54Q96N23 3096 aa13.24□□□□□ -0.29
LRRC28-214ENST00000559433 CHURC1-FNTBB4DL54 471 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 RNF225M0QZC1 329 aaPredicted RBP13.23□□□□□ -0.29
LRRC28-214ENST00000559433 PAPSS2O95340 614 aaPredicted RBP13.23□□□□□ -0.29
LRRC28-214ENST00000559433 BRD2P25440 801 aaKnown RBP13.23□□□□□ -0.29
LRRC28-214ENST00000559433 CNR2P34972 360 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 OPRD1P41143 372 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 MTIF2P46199 727 aaKnown RBP13.23□□□□□ -0.29
LRRC28-214ENST00000559433 FNTBP49356 437 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 GAB4Q2WGN9 574 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 BTBD8Q5XKL5 378 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 PKN3Q6P5Z2 889 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 KLHDC10Q6PID8 442 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 RHBDF2Q6PJF5 856 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 LCLAT1Q6UWP7 414 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 PRR23BQ6ZRT6 265 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 NUDT18Q6ZVK8 323 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 CEP68Q76N32 757 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 LONP2Q86WA8 852 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 MIB1Q86YT6 1006 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 TFAP2BQ92481 460 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 WBP2Q969T9 261 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 KREMEN1Q96MU8 473 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 CDK5RAP1Q96SZ6 601 aaKnown RBP13.23□□□□□ -0.29
LRRC28-214ENST00000559433 CRACR2AQ9BSW2 395 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 THAP9Q9H5L6 903 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 LRRC4Q9HBW1 653 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 CLIC5Q9NZA1 410 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 GMEB2Q9UKD1 530 aa13.23□□□□□ -0.29
LRRC28-214ENST00000559433 K7ESF4 209 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 M0QYV0 167 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 LILRB5O75023 590 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 ZBED1O96006 694 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 CALCAP01258 141 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 SETSIPP0DME0 302 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 KRT5P13647 590 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 PLA2G4AP47712 749 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 SEC13P55735 322 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 YWHAGP61981 247 aaKnown RBP eCLIP13.22□□□□□ -0.29
LRRC28-214ENST00000559433 GAD2Q05329 585 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 DMWDQ09019 674 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 ADIGQ0VDE8 80 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 SIM2Q14190 667 aaPredicted RBP13.22□□□□□ -0.29
LRRC28-214ENST00000559433 PREPLQ4J6C6 727 aaPredicted RBP13.22□□□□□ -0.29
LRRC28-214ENST00000559433 LY6G5CQ5SRR4 150 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 HTR3DQ70Z44 454 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 RSRC2Q7L4I2 434 aaKnown RBP13.22□□□□□ -0.29
LRRC28-214ENST00000559433 IRF2BP1Q8IU81 584 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 FAM114A1Q8IWE2 563 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 KIAA2013Q8IYS2 634 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 SIX6OS1Q8N1H7 587 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 ZNF276Q8N554 614 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 GPR161Q8N6U8 529 aaKnown RBP13.22□□□□□ -0.29
LRRC28-214ENST00000559433 RPLP0P6Q8NHW5 317 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 EZH1Q92800 747 aaPredicted RBP13.22□□□□□ -0.29
LRRC28-214ENST00000559433 IPO9Q96P70 1041 aaKnown RBP13.22□□□□□ -0.29
LRRC28-214ENST00000559433 ULBP1Q9BZM6 244 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 UBE2TQ9NPD8 197 aaPredicted RBP13.22□□□□□ -0.29
LRRC28-214ENST00000559433 RASAL2Q9UJF2 1139 aa13.22□□□□□ -0.29
LRRC28-214ENST00000559433 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.22□□□□□ -0.29
LRRC28-214ENST00000559433 SMG5Q9UPR3 1016 aaKnown RBP13.22□□□□□ -0.29
LRRC28-214ENST00000559433 EML5Q05BV3 1969 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 GOLGA6L22H0YM25 854 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 HMBSP08397 361 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 ERCC5P28715 1186 aaPredicted RBP13.21□□□□□ -0.29
LRRC28-214ENST00000559433 EIF2DP41214 584 aaKnown RBP13.21□□□□□ -0.29
LRRC28-214ENST00000559433 SLC6A11P48066 632 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 ZNF132P52740 706 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 MFAP3P55082 362 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 KDSRQ06136 332 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 EFEMP1Q12805 493 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 STILQ15468 1287 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 CNGA2Q16280 664 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 ANO4Q32M45 955 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 PKDCCQ504Y2 493 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 PM20D1Q6GTS8 502 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 TRIM65Q6PJ69 517 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 GBP6Q6ZN66 633 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 C12orf40Q86WS4 652 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 SUMF1Q8NBK3 374 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 NDRG1Q92597 394 aaKnown RBP13.21□□□□□ -0.29
LRRC28-214ENST00000559433 ACDQ96AP0 544 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 PNKPQ96T60 521 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 ZSWIM1Q9BR11 485 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms