RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 PLXND1Q9Y4D7 1925 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 K7ESF4 209 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 RNF225M0QZC1 329 aaPredicted RBP11.51□□□□□ -0.57
SPG11-216ENST00000559347 MDM4O15151 490 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 GREM1O60565 184 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 ADH1CP00326 375 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 LMNAP02545 664 aaKnown RBP11.51□□□□□ -0.57
SPG11-216ENST00000559347 ATP5C1P36542 298 aaKnown RBP11.51□□□□□ -0.57
SPG11-216ENST00000559347 EIF2DP41214 584 aaKnown RBP11.51□□□□□ -0.57
SPG11-216ENST00000559347 PLA2G4AP47712 749 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 CXCL12P48061 93 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 GALK1P51570 392 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 TKTL1P51854 596 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 ADIGQ0VDE8 80 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 DHCR24Q15392 516 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 FBXO43Q4G163 708 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 PKDCCQ504Y2 493 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 BHLHA9Q7RTU4 235 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 C12orf40Q86WS4 652 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 BBS7Q8IWZ6 715 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 ADGRG2Q8IZP9 1017 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 ZNF276Q8N554 614 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 GPT2Q8TD30 523 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 EXOC4Q96A65 974 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 ZSWIM1Q9BR11 485 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 THAP9Q9H5L6 903 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 DACH1Q9UI36 760 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 NUDT5Q9UKK9 219 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 KIAA1257Q9ULG3 409 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 CNTN6Q9UQ52 1028 aa11.51□□□□□ -0.57
SPG11-216ENST00000559347 RIF1Q5UIP0 2472 aaKnown RBP11.51□□□□□ -0.57
SPG11-216ENST00000559347 LAMA1P25391 3075 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 CHURC1-FNTBB4DL54 471 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 M0QYV0 167 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 ZBED1O96006 694 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 CALCAP01258 141 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 ADH5P11766 374 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 BRD2P25440 801 aaKnown RBP11.5□□□□□ -0.57
SPG11-216ENST00000559347 ERCC5P28715 1186 aaPredicted RBP11.5□□□□□ -0.57
SPG11-216ENST00000559347 NRLP54845 237 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 YWHAGP61981 247 aaKnown RBP eCLIP11.5□□□□□ -0.57
SPG11-216ENST00000559347 GOLGA8FQ08AF8 430 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 GOLGA8DPQ0D2H9 430 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 STILQ15468 1287 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 TPD52L1Q16890 204 aaPredicted RBP11.5□□□□□ -0.57
SPG11-216ENST00000559347 C10orf120Q5SQS8 335 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 LY6G5CQ5SRR4 150 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 RHBDF2Q6PJF5 856 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 LCLAT1Q6UWP7 414 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 RBM43Q6ZSC3 357 aaKnown RBP11.5□□□□□ -0.57
SPG11-216ENST00000559347 HTR3DQ70Z44 454 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 TADA2BQ86TJ2 420 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 SUMF1Q8NBK3 374 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 UBA3Q8TBC4 463 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 IPO9Q96P70 1041 aaKnown RBP11.5□□□□□ -0.57
SPG11-216ENST00000559347 CDK5RAP1Q96SZ6 601 aaKnown RBP11.5□□□□□ -0.57
SPG11-216ENST00000559347 CRACR2AQ9BSW2 395 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 ULBP1Q9BZM6 244 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 EPC1Q9H2F5 836 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 DNMT3LQ9UJW3 386 aa11.5□□□□□ -0.57
SPG11-216ENST00000559347 MUC22E2RYF6 1773 aaPredicted RBP11.49□□□□□ -0.57
SPG11-216ENST00000559347 GTPBP10A4D1E9 387 aaKnown RBP11.49□□□□□ -0.57
SPG11-216ENST00000559347 HOXC11O43248 304 aaPredicted RBP11.49□□□□□ -0.57
SPG11-216ENST00000559347 STC2O76061 302 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 RALAP11233 206 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 SLC9A1P19634 815 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 HOXC13P31276 330 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 MTIF2P46199 727 aaKnown RBP11.49□□□□□ -0.57
SPG11-216ENST00000559347 APBA1Q02410 837 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 KDSRQ06136 332 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 DMWDQ09019 674 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 MESP2Q0VG99 397 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 MAN2A1Q16706 1144 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 PM20D1Q6GTS8 502 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 GJB7Q6PEY0 223 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 GBP6Q6ZN66 633 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 Q6ZNB5 142 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 MIB1Q86YT6 1006 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 CREBRFQ8IUR6 639 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 FAM114A1Q8IWE2 563 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 ETFBKMTQ8IXQ9 262 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 SCML4Q8N228 414 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 ARHGAP18Q8N392 663 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 PHTF2Q8N3S3 785 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 RPLP0P6Q8NHW5 317 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 SLC35F5Q8WV83 523 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 ATRIPQ8WXE1 791 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 KCTD13Q8WZ19 329 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 LRRC4Q9HBW1 653 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 UBE2TQ9NPD8 197 aaPredicted RBP11.49□□□□□ -0.57
SPG11-216ENST00000559347 SPHK2Q9NRA0 654 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 APEX2Q9UBZ4 518 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 RASAL2Q9UJF2 1139 aa11.49□□□□□ -0.57
SPG11-216ENST00000559347 LSM7Q9UK45 103 aaKnown RBP11.49□□□□□ -0.57
SPG11-216ENST00000559347 GOLGA6L22H0YM25 854 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 K7EQS6 105 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 ATG13O75143 517 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 GABBR2O75899 941 aa11.48□□□□□ -0.57
SPG11-216ENST00000559347 CHRM1P11229 460 aaPredicted RBP11.48□□□□□ -0.57
SPG11-216ENST00000559347 KRT5P13647 590 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms