RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ACADSBP45954 432 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 SOX9P48436 509 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 HARS2P49590 506 aaKnown RBP4.59□□□□□ -1.67
SNX1-205ENST00000559339 TSC2P49815 1807 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 BPIFB4P59827 614 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 YWHAGP61981 247 aaKnown RBP eCLIP4.59□□□□□ -1.67
SNX1-205ENST00000559339 MYL5Q02045 173 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 CSTF1Q05048 431 aaKnown RBP4.59□□□□□ -1.67
SNX1-205ENST00000559339 GAD2Q05329 585 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 PDE4CQ08493 712 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 ADIGQ0VDE8 80 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 MTAPQ13126 283 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 RAPGEF1Q13905 1077 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 CCINQ13939 588 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 DHCR24Q15392 516 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 MEA1Q16626 185 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 ARHGAP44Q17R89 818 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 ANO4Q32M45 955 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 EML3Q32P44 896 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 HSP90AA4PQ58FG1 418 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 TCP11X2Q5H9J9 407 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 TMEM196Q5HYL7 178 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 RAB41Q5JT25 222 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 PM20D1Q6GTS8 502 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 TXNDC11Q6PKC3 985 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 RBM43Q6ZSC3 357 aaKnown RBP4.59□□□□□ -1.67
SNX1-205ENST00000559339 GPRIN1Q7Z2K8 1008 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 TTC30AQ86WT1 665 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 MIB1Q86YT6 1006 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 SPEM1Q8N4L4 309 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 ZNF276Q8N554 614 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 UBA3Q8TBC4 463 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 CD101Q93033 1021 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 SECISBP2LQ93073 1101 aaKnown RBP4.59□□□□□ -1.67
SNX1-205ENST00000559339 NKD2Q969F2 451 aaPredicted RBP4.59□□□□□ -1.67
SNX1-205ENST00000559339 DOCK6Q96HP0 2047 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 HSFY1Q96LI6 401 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 NOX5Q96PH1 765 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 XPO6Q96QU8 1125 aaKnown RBP4.59□□□□□ -1.67
SNX1-205ENST00000559339 MED15Q96RN5 788 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 PDCL3Q9H2J4 239 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 LINC00597Q9H2U6 94 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 CHRDQ9H2X0 955 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 OCEL1Q9H607 264 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 SYNCQ9H7C4 482 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 HPS4Q9NQG7 708 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 ST7Q9NRC1 585 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 ABCC13Q9NSE7 274 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 SAMSN1Q9NSI8 373 aaKnown RBP4.59□□□□□ -1.67
SNX1-205ENST00000559339 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.59□□□□□ -1.67
SNX1-205ENST00000559339 WDR35Q9P2L0 1181 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.59□□□□□ -1.67
SNX1-205ENST00000559339 CNTN6Q9UQ52 1028 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 PCDHGA2Q9Y5H1 932 aa4.59□□□□□ -1.67
SNX1-205ENST00000559339 NOTCH4Q99466 2003 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 TBC1D3BA6NDS4 549 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 OTOL1A6NHN0 477 aaPredicted RBP4.58□□□□□ -1.68
SNX1-205ENST00000559339 SMTNL1A8MU46 457 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 BECN2A8MW95 431 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 RNF225M0QZC1 329 aaPredicted RBP4.58□□□□□ -1.68
SNX1-205ENST00000559339 CAPN9O14815 690 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 ZBTB24O43167 697 aaPredicted RBP4.58□□□□□ -1.68
SNX1-205ENST00000559339 LMNAP02545 664 aaKnown RBP4.58□□□□□ -1.68
SNX1-205ENST00000559339 CYBBP04839 570 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 APODP05090 189 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 CYP17A1P05093 508 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 SP9P0CG40 484 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 C7P10643 843 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 ADH5P11766 374 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 NCAM1P13591 858 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 SLC9A1P19634 815 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 BRD2P25440 801 aaKnown RBP4.58□□□□□ -1.68
SNX1-205ENST00000559339 NBL1P41271 181 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 GRIA2P42262 883 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 MRE11P49959 708 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 GALK1P51570 392 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 ZNF445P59923 1031 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 TPM4P67936 248 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 ZXDBP98169 803 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 TYRO3Q06418 890 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 EFEMP1Q12805 493 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 FZD5Q13467 585 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 E2F5Q15329 346 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 PKDCCQ504Y2 493 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 MIIPQ5JXC2 388 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 LY6G5CQ5SRR4 150 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 BSPRYQ5W0U4 402 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 CAVIN1Q6NZI2 390 aaKnown RBP4.58□□□□□ -1.68
SNX1-205ENST00000559339 PMF1Q6P1K2 205 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 TPGS1Q6ZTW0 290 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 HTR3DQ70Z44 454 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 TRMT11Q7Z4G4 463 aaKnown RBP4.58□□□□□ -1.68
SNX1-205ENST00000559339 ALYREFQ86V81 257 aaKnown RBP4.58□□□□□ -1.68
SNX1-205ENST00000559339 IRF2BP1Q8IU81 584 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 FMNL3Q8IVF7 1028 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 ARHGEF19Q8IW93 802 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 UNC45BQ8IWX7 931 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 BBS7Q8IWZ6 715 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 SCML4Q8N228 414 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 UBR7Q8N806 425 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms