RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 E2F4Q16254 413 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 SOWAHAQ2M3V2 549 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 EML3Q32P44 896 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 SV2CQ496J9 727 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 CFAP221Q4G0U5 840 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 INTS6LQ5JSJ4 861 aaKnown RBP6.22□□□□□ -1.41
USP3-212ENST00000559276 EMC10Q5UCC4 262 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 FAM171BQ6P995 826 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 LRRC31Q6UY01 552 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 MICALCLQ6ZW33 695 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 YTHDF3Q7Z739 585 aaKnown RBP6.22□□□□□ -1.41
USP3-212ENST00000559276 METTL23Q86XA0 190 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 NT5DC4Q86YG4 428 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 DCP1BQ8IZD4 617 aaKnown RBP6.22□□□□□ -1.41
USP3-212ENST00000559276 THEM5Q8N1Q8 247 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 MMGT1Q8N4V1 131 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 LRRC52Q8N7C0 313 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 C3orf20Q8ND61 904 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 TRIM58Q8NG06 486 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 OR5B17Q8NGF7 314 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 KBTBD7Q8WVZ9 684 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 GAB3Q8WWW8 586 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 HPS3Q969F9 1004 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 CAVIN3Q969G5 261 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 TRMT2BQ96GJ1 504 aaKnown RBP6.22□□□□□ -1.41
USP3-212ENST00000559276 ZC3H10Q96K80 434 aaKnown RBP6.22□□□□□ -1.41
USP3-212ENST00000559276 EDEM3Q9BZQ6 932 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 ARRDC1-AS1Q9H2J1 176 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 LINC00597Q9H2U6 94 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 SMOC1Q9H4F8 434 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 CRTAC1Q9NQ79 661 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 OLFML3Q9NRN5 406 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 TDP1Q9NUW8 608 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 TMEM30AQ9NV96 361 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 GDAP2Q9NXN4 497 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 DDX43Q9NXZ2 648 aaKnown RBP6.22□□□□□ -1.41
USP3-212ENST00000559276 MAGEC2Q9UBF1 373 aaPredicted RBP6.22□□□□□ -1.41
USP3-212ENST00000559276 SEL1LQ9UBV2 794 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 STK17AQ9UEE5 414 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 RAB23Q9ULC3 237 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 MAGED2Q9UNF1 606 aaPredicted RBP6.22□□□□□ -1.41
USP3-212ENST00000559276 AGAP1Q9UPQ3 857 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 TNRC6BQ9UPQ9 1833 aaKnown RBP6.22□□□□□ -1.41
USP3-212ENST00000559276 SPEGQ15772 3267 aa6.22□□□□□ -1.41
USP3-212ENST00000559276 ZZEF1O43149 2961 aa6.21□□□□□ -1.41
USP3-212ENST00000559276 ACACBO00763 2458 aa6.21□□□□□ -1.41
USP3-212ENST00000559276 MAP1BP46821 2468 aaKnown RBP6.21□□□□□ -1.41
USP3-212ENST00000559276 GOLGA6CA6NDK9 693 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 GOLGA6BA6NDN3 693 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 LRRIQ3A6PVS8 624 aaPredicted RBP6.21□□□□□ -1.42
USP3-212ENST00000559276 DCLK1O15075 740 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 AXIN1O15169 862 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 RPP40O75818 363 aaKnown RBP6.21□□□□□ -1.42
USP3-212ENST00000559276 RHOXF2BP0C7M4 288 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 ZNF806P0C7X5 589 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 GOLGA6DP0CG33 693 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 CSH1P0DML2 217 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 CSH2P0DML3 217 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 HNRNPLP14866 589 aaKnown RBP eCLIP6.21□□□□□ -1.42
USP3-212ENST00000559276 TCF3P15923 654 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 GARTP22102 1010 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 ABCD1P33897 745 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 AVPR1AP37288 418 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 OPRD1P41143 372 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 PNPLA4P41247 253 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 LIMK1P53667 647 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 CACNA2D1P54289 1103 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 USP46P62068 366 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 MESP2Q0VG99 397 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 NFE2Q16621 373 aaPredicted RBP6.21□□□□□ -1.42
USP3-212ENST00000559276 PLK5Q496M5 336 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 CCDC122Q5T0U0 273 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 LMBRD2Q68DH5 695 aaPredicted RBP6.21□□□□□ -1.42
USP3-212ENST00000559276 TCEAL6Q6IPX3 200 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 CCNI2Q6ZMN8 369 aaPredicted RBP6.21□□□□□ -1.42
USP3-212ENST00000559276 CCDC91Q7Z6B0 441 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 TAX1BP1Q86VP1 789 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 SFTPA1Q8IWL2 248 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 TMEM86AQ8N2M4 240 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 CSGALNACT2Q8N6G5 542 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 TOP6BLQ8N6T0 577 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 NOA1Q8NC60 698 aaKnown RBP6.21□□□□□ -1.42
USP3-212ENST00000559276 AENQ8WTP8 325 aaKnown RBP6.21□□□□□ -1.42
USP3-212ENST00000559276 OSCP1Q8WVF1 389 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 TCEAL3Q969E4 200 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 JAKMIP2Q96AA8 810 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 DHTKD1Q96HY7 919 aaPredicted RBP6.21□□□□□ -1.42
USP3-212ENST00000559276 LOXL4Q96JB6 756 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 ZNF560Q96MR9 790 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 ALS2CR12Q96Q35 445 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 GCNAQ96QF7 691 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 ACCSQ96QU6 501 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 HHIPQ96QV1 700 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 SH3GL2Q99962 352 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 NCAPGQ9BPX3 1015 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 RHOXF2Q9BQY4 288 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 MTMR12Q9C0I1 747 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 DUSP15Q9H1R2 295 aaPredicted RBP6.21□□□□□ -1.42
USP3-212ENST00000559276 PCIF1Q9H4Z3 704 aa6.21□□□□□ -1.42
USP3-212ENST00000559276 ECT2Q9H8V3 914 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms