RNA–Protein interactions for RNA: ENST00000559243.1

CCDC33-207, Transcript of coiled-coil domain containing 33, humanhuman

TSL 4

Gene CCDC33, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-207ENST00000559243 SPOPLQ6IQ16 392 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 NUDT18Q6ZVK8 323 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 LPCAT2Q7L5N7 544 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 TMEM25Q86YD3 366 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 ETFBKMTQ8IXQ9 262 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 PGBD3Q8N328 593 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 PHTF2Q8N3S3 785 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 C12orf29Q8N999 325 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 HMGB4Q8WW32 186 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 RLN3Q8WXF3 142 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 PIGKQ92643 395 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 WBP2Q969T9 261 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 DUSP9Q99956 384 aaKnown RBP11.31□□□□□ -0.6
CCDC33-207ENST00000559243 CSNK1G1Q9HCP0 422 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 TLR8Q9NR97 1041 aaKnown RBP11.31□□□□□ -0.6
CCDC33-207ENST00000559243 HMGXB4Q9UGU5 601 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 USP25Q9UHP3 1055 aa11.31□□□□□ -0.6
CCDC33-207ENST00000559243 MAST4O15021 2626 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 TCRBV21S2A2A0A5A6 115 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 PATE3B3GLJ2 98 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 ADAM23O75077 832 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 TULP3O75386 442 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 TBX18O95935 607 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 HLA-DRAP01903 254 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 FAM200BP0CF97 657 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 CMA1P23946 247 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 PGFP49763 221 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 VAMP7P51809 220 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 BYSLQ13895 437 aaKnown RBP11.3□□□□□ -0.6
CCDC33-207ENST00000559243 C10orf76Q5T2E6 689 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 PSAPL1Q6NUJ1 521 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 HTR3DQ70Z44 454 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 TRMT11Q7Z4G4 463 aaKnown RBP11.3□□□□□ -0.6
CCDC33-207ENST00000559243 ZNF513Q8N8E2 541 aaPredicted RBP11.3□□□□□ -0.6
CCDC33-207ENST00000559243 KCNV2Q8TDN2 545 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 CCDC47Q96A33 483 aaKnown RBP11.3□□□□□ -0.6
CCDC33-207ENST00000559243 JAKMIP2Q96AA8 810 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 SPATA32Q96LK8 384 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 IMPG2Q9BZV3 1241 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 TMEM9BQ9NQ34 198 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC33-207ENST00000559243 TRAF3IP3Q9Y228 551 aa11.3□□□□□ -0.6
CCDC33-207ENST00000559243 ASCC3Q8N3C0 2202 aaKnown RBP11.29□□□□□ -0.6
CCDC33-207ENST00000559243 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 MAPK13O15264 365 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 ACO1P21399 889 aaKnown RBP11.29□□□□□ -0.6
CCDC33-207ENST00000559243 ATP5C1P36542 298 aaKnown RBP11.29□□□□□ -0.6
CCDC33-207ENST00000559243 NOVA1P51513 510 aaKnown RBP11.29□□□□□ -0.6
CCDC33-207ENST00000559243 IRX4P78413 519 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 SHC2P98077 582 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 GOLGA8FQ08AF8 430 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 GOLGA8DPQ0D2H9 430 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 C1orf220Q5T0J3 134 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 GRAMD4Q6IC98 578 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 CLEC20AQ6ZU45 233 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 INTS8Q75QN2 995 aaKnown RBP11.29□□□□□ -0.6
CCDC33-207ENST00000559243 ARMCX6Q7L4S7 300 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 GPRIN1Q7Z2K8 1008 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 TMEFF1Q8IYR6 380 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 FRMD1Q8N878 549 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 TERB1Q8NA31 727 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 CYFIP2Q96F07 1278 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 XPO6Q96QU8 1125 aaKnown RBP11.29□□□□□ -0.6
CCDC33-207ENST00000559243 TWNKQ96RR1 684 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 HNRNPABQ99729 332 aaKnown RBP11.29□□□□□ -0.6
CCDC33-207ENST00000559243 NT5C1AQ9BXI3 368 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 KLF16Q9BXK1 252 aaPredicted RBP11.29□□□□□ -0.6
CCDC33-207ENST00000559243 NUSAP1Q9BXS6 441 aaKnown RBP11.29□□□□□ -0.6
CCDC33-207ENST00000559243 CYP3A43Q9HB55 503 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 CYLDQ9NQC7 956 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 DNAJC17Q9NVM6 304 aaKnown RBP11.29□□□□□ -0.6
CCDC33-207ENST00000559243 MBD1Q9UIS9 605 aaPredicted RBP11.29□□□□□ -0.6
CCDC33-207ENST00000559243 LSM7Q9UK45 103 aaKnown RBP11.29□□□□□ -0.6
CCDC33-207ENST00000559243 SCML2Q9UQR0 700 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 HPSEQ9Y251 543 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 PLXND1Q9Y4D7 1925 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 SPEGQ15772 3267 aa11.29□□□□□ -0.6
CCDC33-207ENST00000559243 HHLA1C9JL84 531 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 NEDD8-MDP1E9PL57 170 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 CDX4O14627 284 aaPredicted RBP11.28□□□□□ -0.6
CCDC33-207ENST00000559243 TRIM24O15164 1050 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 CYP26A1O43174 497 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 GREM1O60565 184 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 RHOBTB3O94955 611 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 TRIM49P0CI25 452 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 TRIM49CP0CI26 452 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 RARGP13631 454 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 KRT13P13646 458 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 HOXB2P14652 356 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 NR2F2P24468 414 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 NTSR1P30989 418 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 DPP6P42658 865 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 WASP42768 502 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 PTGER3P43115 390 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 SYKP43405 635 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 GCLMP48507 274 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 INCA1Q0VD86 236 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 LMAN2Q12907 356 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 MAP7D1Q3KQU3 841 aa11.28□□□□□ -0.6
CCDC33-207ENST00000559243 TRIM61Q5EBN2 209 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms