RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 PATE3B3GLJ2 98 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 MAPK13O15264 365 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 GREM1O60565 184 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 TBX18O95935 607 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 FAM200BP0CF97 657 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 IRF1P10914 325 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 TRIM21P19474 475 aaKnown RBP16.11■□□□□ 0.17
IRF9-204ENST00000559229 NOVA1P51513 510 aaKnown RBP16.11■□□□□ 0.17
IRF9-204ENST00000559229 CEP135Q66GS9 1140 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 SPOPLQ6IQ16 392 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 SYT12Q8IV01 421 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 FRMD1Q8N878 549 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 ZNF513Q8N8E2 541 aaPredicted RBP16.11■□□□□ 0.17
IRF9-204ENST00000559229 TERB1Q8NA31 727 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 HMGB4Q8WW32 186 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 HNRNPABQ99729 332 aaKnown RBP16.11■□□□□ 0.17
IRF9-204ENST00000559229 KLF16Q9BXK1 252 aaPredicted RBP16.11■□□□□ 0.17
IRF9-204ENST00000559229 CYLDQ9NQC7 956 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 FAM49BQ9NUQ9 324 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 MBD1Q9UIS9 605 aaPredicted RBP16.11■□□□□ 0.17
IRF9-204ENST00000559229 CIZ1Q9ULV3 898 aaPredicted RBP16.11■□□□□ 0.17
IRF9-204ENST00000559229 SCML2Q9UQR0 700 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 TRAF3IP3Q9Y228 551 aa16.11■□□□□ 0.17
IRF9-204ENST00000559229 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 A0A1B0GVL5 298 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 HHLA1C9JL84 531 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 CALUO43852 315 aaPredicted RBP16.1■□□□□ 0.17
IRF9-204ENST00000559229 KIF20AO95235 890 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 HLA-DRAP01903 254 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 PFKFB1P16118 471 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 ATP5C1P36542 298 aaKnown RBP16.1■□□□□ 0.17
IRF9-204ENST00000559229 PIK3CAP42336 1068 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 DPP6P42658 865 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 VAMP7P51809 220 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 INCA1Q0VD86 236 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 LMAN2Q12907 356 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 COL9A2Q14055 689 aaPredicted RBP16.1■□□□□ 0.17
IRF9-204ENST00000559229 C10orf76Q5T2E6 689 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 CLEC20AQ6ZU45 233 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 TMEFF1Q8IYR6 380 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 PGBD3Q8N328 593 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 CYP3A43Q9HB55 503 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 PNPLA8Q9NP80 782 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 HCN2Q9UL51 889 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 HPSEQ9Y251 543 aa16.1■□□□□ 0.17
IRF9-204ENST00000559229 GIPC1O14908 333 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 TRIM24O15164 1050 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 CEACAM1P13688 526 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 CSRP1P21291 193 aaKnown RBP16.09■□□□□ 0.17
IRF9-204ENST00000559229 ADORA2BP29275 332 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 NTSR1P30989 418 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 PTGER3P43115 390 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 ENPEPQ07075 957 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 GOLGA8FQ08AF8 430 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 GOLGA8DPQ0D2H9 430 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 NFIL3Q16649 462 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 TRIM61Q5EBN2 209 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 SH3PXD2AQ5TCZ1 1133 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 GRAMD4Q6IC98 578 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 KLHDC10Q6PID8 442 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 INTS8Q75QN2 995 aaKnown RBP16.09■□□□□ 0.17
IRF9-204ENST00000559229 CYFIP2Q96F07 1278 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 XPO6Q96QU8 1125 aaKnown RBP16.09■□□□□ 0.17
IRF9-204ENST00000559229 NT5C1AQ9BXI3 368 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 NUSAP1Q9BXS6 441 aaKnown RBP16.09■□□□□ 0.17
IRF9-204ENST00000559229 IMPG2Q9BZV3 1241 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 TMEM74BQ9NUR3 256 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 DNAJC17Q9NVM6 304 aaKnown RBP16.09■□□□□ 0.17
IRF9-204ENST00000559229 OSER1Q9NX31 292 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 MARK1Q9P0L2 795 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 WDR35Q9P2L0 1181 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 LSM7Q9UK45 103 aaKnown RBP16.09■□□□□ 0.17
IRF9-204ENST00000559229 PCDHA5Q9Y5H7 936 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 MYOFQ9NZM1 2061 aa16.09■□□□□ 0.17
IRF9-204ENST00000559229 THADAQ6YHU6 1953 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 NEDD8-MDP1E9PL57 170 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 CACNG3O60359 315 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 RHOBTB3O94955 611 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 HOXB2P14652 356 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 TYRP14679 529 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 ACO1P21399 889 aaKnown RBP16.08■□□□□ 0.16
IRF9-204ENST00000559229 PLA2G4AP47712 749 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 LYSMD4Q5XG99 296 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 SLC23A3Q6PIS1 610 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 GPRIN1Q7Z2K8 1008 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 MIB1Q86YT6 1006 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 ZNF276Q8N554 614 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 TWNKQ96RR1 684 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 BBS2Q9BXC9 721 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 APOBEC3GQ9HC16 384 aaKnown RBP16.08■□□□□ 0.16
IRF9-204ENST00000559229 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.08■□□□□ 0.16
IRF9-204ENST00000559229 DNMT3LQ9UJW3 386 aa16.08■□□□□ 0.16
IRF9-204ENST00000559229 WDFY3Q8IZQ1 3526 aa16.07■□□□□ 0.16
IRF9-204ENST00000559229 GON4LQ3T8J9 2241 aa16.07■□□□□ 0.16
IRF9-204ENST00000559229 A0A1W2PQF6 199 aa16.07■□□□□ 0.16
IRF9-204ENST00000559229 A0A1W2PQH9 124 aa16.07■□□□□ 0.16
IRF9-204ENST00000559229 ZBTB24O43167 697 aaPredicted RBP16.07■□□□□ 0.16
IRF9-204ENST00000559229 CYP26A1O43174 497 aa16.07■□□□□ 0.16
IRF9-204ENST00000559229 AP5Z1O43299 807 aa16.07■□□□□ 0.16
IRF9-204ENST00000559229 CILPO75339 1184 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms