RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 LRRC34Q8IZ02 419 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 PQLC3Q8N755 202 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 PCDH19Q8TAB3 1148 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 PPP1R13LQ8WUF5 828 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 PPP1R10Q96QC0 940 aaKnown RBP11.74□□□□□ -0.53
CLPX-204ENST00000559152 PLCD4Q9BRC7 762 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 KLC2Q9H0B6 622 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 NRDE2Q9H7Z3 1164 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 SSU72Q9NP77 194 aaKnown RBP11.74□□□□□ -0.53
CLPX-204ENST00000559152 GTF2IRD1Q9UHL9 959 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 GPR182O15218 404 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 KCNN4O15554 427 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 GABBR2O75899 941 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 SLC10A3P09131 477 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 NPR3P17342 541 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 PTPN1P18031 435 aaKnown RBP11.74□□□□□ -0.53
CLPX-204ENST00000559152 IRX5P78411 483 aaPredicted RBP11.74□□□□□ -0.53
CLPX-204ENST00000559152 SLC25A52Q3SY17 297 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 PPP6R3Q5H9R7 873 aaPredicted RBP11.74□□□□□ -0.53
CLPX-204ENST00000559152 FNBP1LQ5T0N5 605 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 ANKRD22Q5VYY1 191 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 NPNTQ6UXI9 565 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 RPAINQ86UA6 219 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 SAPCD2Q86UD0 394 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 ANKRD42Q8N9B4 389 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 FBXO36Q8NEA4 188 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 MAGEB18Q96M61 343 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
CLPX-204ENST00000559152 ACSS3Q9H6R3 686 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 C10orf88Q9H8K7 445 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 USP29Q9HBJ7 922 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 LRRC4Q9HBW1 653 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 FAM105AQ9NUU6 356 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 STAP1Q9ULZ2 295 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 AP4E1Q9UPM8 1137 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 HEY1Q9Y5J3 304 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 CDY2AQ9Y6F7 541 aa11.74□□□□□ -0.53
CLPX-204ENST00000559152 GABRDO14764 452 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 TRIM66O15016 1216 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 PAX3P23760 479 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 CYP2F1P24903 491 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 GCAP28676 217 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 L1CAMP32004 1257 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 ARL4AP40617 200 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 FCGRTP55899 365 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 KCNJ11Q14654 390 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 BBS9Q3SYG4 887 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 PIGZQ86VD9 579 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 ANKMY2Q8IV38 441 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 ARRDC4Q8NCT1 418 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 MGARPQ8TDB4 240 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 GRAMD1AQ96CP6 724 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 CYTH2Q99418 400 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 FERMT1Q9BQL6 677 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 KDM4CQ9H3R0 1056 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 TRABDQ9H4I3 376 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 DHX35Q9H5Z1 703 aaKnown RBP11.73□□□□□ -0.53
CLPX-204ENST00000559152 GOLGA2P5Q9HBQ8 144 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 RABGEF1Q9UJ41 708 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 ST3GAL5Q9UNP4 418 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 GIT1Q9Y2X7 761 aa11.73□□□□□ -0.53
CLPX-204ENST00000559152 ANKRD65E5RJM6 399 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 PTGESO14684 152 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 DAB1O75553 588 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 TMEM63AO94886 807 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 FBXO21O94952 628 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 FSBPO95073 299 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 CPP00450 1065 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 THP07101 528 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 GHRP10912 638 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 RPL9P32969 192 aaKnown RBP11.72□□□□□ -0.53
CLPX-204ENST00000559152 NOS2P35228 1153 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 MAGEA6P43360 314 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 GPX6P59796 221 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 YWHAZP63104 245 aaKnown RBP11.72□□□□□ -0.53
CLPX-204ENST00000559152 NKX3-2P78367 333 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 LRRC14Q15048 493 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 RAB6CQ53S08 254 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 HP1BP3Q5SSJ5 553 aaPredicted RBP11.72□□□□□ -0.53
CLPX-204ENST00000559152 ZNF618Q5T7W0 954 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 SIX6OS1Q8N1H7 587 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 ALKBH8Q96BT7 664 aaKnown RBP11.72□□□□□ -0.53
CLPX-204ENST00000559152 RAB6CQ9H0N0 254 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 UPF3AQ9H1J1 476 aaKnown RBP11.72□□□□□ -0.53
CLPX-204ENST00000559152 RAB6BQ9NRW1 208 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 GPATCH2LQ9NWQ4 482 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 SCN1AP35498 2009 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 HACD1B0YJ81 288 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 TCP11X1B4DZS4 312 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 GSTA2P09210 222 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 FAM200BP0CF97 657 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 CREB1P16220 341 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 MSH2P43246 934 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 AIF1P55008 147 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 MRPS5P82675 430 aaKnown RBP11.72□□□□□ -0.53
CLPX-204ENST00000559152 SPARCL1Q14515 664 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 CA9Q16790 459 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 NBPF20Q3BBV1 942 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 SLC45A4Q5BKX6 768 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 ADGRD1Q6QNK2 874 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms