RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 LRRC3Q9BY71 257 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 THAP2Q9H0W7 228 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 S1PR5Q9H228 398 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 KCNF1Q9H3M0 494 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 IL21Q9HBE4 155 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 POPDC2Q9HBU9 364 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 MRPL47Q9HD33 250 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 WDR6Q9NNW5 1121 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 AVENQ9NQS1 362 aaPredicted RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 ABCC13Q9NSE7 274 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 OLA1Q9NTK5 396 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 CLIC5Q9NZA1 410 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 ZMYM5Q9UJ78 669 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 INTUQ9ULD6 942 aa6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 USP15Q9Y4E8 981 aaPredicted RBP6.91□□□□□ -1.3
CHRNA3-204ENST00000559002 BRWD1Q9NSI6 2320 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 TRAV19A0A0A6YYK7 116 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 SIGLEC16A6NMB1 481 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 TLR5O60602 858 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 TADA3O75528 432 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 GJB6O95452 261 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 CYP1A2P05177 515 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 CKMP06732 381 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 ZDHHC11BP0C7U3 371 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 MBL2P11226 248 aaPredicted RBP6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 GJA1P17302 382 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 CEBPBP17676 345 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 SDC4P31431 198 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 GBP2P32456 591 aaPredicted RBP6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 AVPR1AP37288 418 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 CCR2P41597 374 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 SULT1E1P49888 294 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 TUBP50607 506 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 NAP1L1P55209 391 aaKnown RBP6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 EFEMP1Q12805 493 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 KIF5AQ12840 1032 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 MAMLD1Q13495 774 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 CBX2Q14781 532 aaPredicted RBP6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 TAF5Q15542 800 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 TEAD2Q15562 447 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 SLC5A9Q2M3M2 681 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 DCAF6Q58WW2 860 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 PRSS36Q5K4E3 855 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 C10orf120Q5SQS8 335 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 GPR158Q5T848 1215 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 SNX30Q5VWJ9 437 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 TXNDC8Q6A555 127 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 PLEKHA7Q6IQ23 1121 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 GAREM2Q75VX8 874 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 BHLHA9Q7RTU4 235 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 TMEM150AQ86TG1 271 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 RHOT2Q8IXI1 618 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 DEFB106AQ8N104 65 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 EMC1Q8N766 993 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 MAB21L3Q8N8X9 362 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 JOSD2Q8TAC2 188 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 ITFG1Q8TB96 612 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 ZNF564Q8TBZ8 553 aaPredicted RBP6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 RFFLQ8WZ73 363 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 ARHGEF26Q96DR7 871 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 SERPINB11Q96P15 392 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 SLC2A13Q96QE2 648 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 TSGA10Q9BZW7 698 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 TASP1Q9H6P5 420 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 CCSER2Q9H7U1 834 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 FAM204AQ9H8W3 233 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 NMUR1Q9HB89 426 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 RRN3Q9NYV6 651 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 UVRAGQ9P2Y5 699 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 CDH22Q9UJ99 828 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 RASAL2Q9UJF2 1139 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 STAP1Q9ULZ2 295 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 FAM50BQ9Y247 325 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 REXO2Q9Y3B8 237 aaKnown RBP6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 ADGRG1Q9Y653 693 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 REV3LO60673 3130 aa6.9□□□□□ -1.3
CHRNA3-204ENST00000559002 SPTBN5Q9NRC6 3674 aaKnown RBP6.9□□□□□ -1.31
CHRNA3-204ENST00000559002 SYNJ2BP-COX16A0A087WUM0 186 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 C2orf78A6NCI8 922 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 SOBPA7XYQ1 873 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 DPYSL4O14531 572 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 ZSCAN12O43309 604 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 COCHO43405 550 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 MBTPS2O43462 519 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 KRT86O43790 486 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 OAS1P00973 400 aaKnown RBP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 PDGFRAP16234 1089 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 PFKLP17858 780 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 HDCP19113 662 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 GPD1P21695 349 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 PSMA2P25787 234 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 GBP1P32455 592 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 NOS2P35228 1153 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 RFC1P35251 1148 aaPredicted RBP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 ATP5C1P36542 298 aaKnown RBP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 FLT3P36888 993 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 MATKP42679 507 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms