RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 TDGF1P13385 188 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 ACAT1P24752 427 aaKnown RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 CYP2F1P24903 491 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 NOS2P35228 1153 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 HOXD13P35453 343 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 MAGEA11P43364 429 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 SOX9P48436 509 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 AMPD2Q01433 879 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 ZNF268Q14587 947 aaPredicted RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 SNRNP35Q16560 246 aaKnown RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 DDR2Q16832 855 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 SOWAHAQ2M3V2 549 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 SKOR2Q2VWA4 1001 aaPredicted RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 ITPRIPL2Q3MIP1 535 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 CFAP221Q4G0U5 840 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 ATL3Q6DD88 541 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 SHC4Q6S5L8 630 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 C4orf50Q6ZRC1 276 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 UNC13DQ70J99 1090 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 EPM2AIP1Q7L775 607 aaPredicted RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 HS2ST1Q7LGA3 356 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 TMEM150AQ86TG1 271 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 MON1AQ86VX9 555 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 OSTM1Q86WC4 334 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 CBWD2Q8IUF1 395 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 SPATA2LQ8IUW3 424 aaPredicted RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 WDR49Q8IV35 697 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 KIAA2013Q8IYS2 634 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 ADGRF2Q8IZF7 708 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 SYNPOQ8N3V7 929 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 DCLK2Q8N568 766 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 MAB21L3Q8N8X9 362 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 GLIS3Q8NEA6 775 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 OR5B17Q8NGF7 314 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 TTC8Q8TAM2 541 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 FOXD4L4Q8WXT5 416 aaPredicted RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 TRMT2BQ96GJ1 504 aaKnown RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 FUBP3Q96I24 572 aaKnown RBP eCLIP6.56□□□□□ -1.36
MARK3-216ENST00000558953 ZFYVE19Q96K21 471 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 MYRFLQ96LU7 910 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 PKMYT1Q99640 499 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 C2orf49Q9BVC5 232 aaPredicted RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 SMG9Q9H0W8 520 aaKnown RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 KIF9Q9HAQ2 790 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 GKN1Q9NS71 199 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 DNAJB12Q9NXW2 375 aaKnown RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 FAM13BQ9NYF5 915 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 GTSE1Q9NYZ3 720 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 HSPBP1Q9NZL4 362 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 CGNQ9P2M7 1197 aaKnown RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 SIX4Q9UIU6 781 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 GTF3C4Q9UKN8 822 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 CFAP45Q9UL16 551 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 RAB23Q9ULC3 237 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 MAGED2Q9UNF1 606 aaPredicted RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 SMG5Q9UPR3 1016 aaKnown RBP6.56□□□□□ -1.36
MARK3-216ENST00000558953 RAXQ9Y2V3 346 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 ATG2BQ96BY7 2078 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 SPAG17Q6Q759 2223 aa6.56□□□□□ -1.36
MARK3-216ENST00000558953 MYO15AQ9UKN7 3530 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 PTPRJQ12913 1337 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 CFAP54Q96N23 3096 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 HELZP42694 1942 aaKnown RBP6.55□□□□□ -1.36
MARK3-216ENST00000558953 PVALEFA0A1B0GWK0 134 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 POLR2DO15514 142 aaKnown RBP6.55□□□□□ -1.36
MARK3-216ENST00000558953 TGFB1I1O43294 461 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 PAPSS2O95340 614 aaPredicted RBP6.55□□□□□ -1.36
MARK3-216ENST00000558953 F13A1P00488 732 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 FAM163BP0C2L3 166 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 USP17L7P0C7H9 530 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 TNNI1P19237 187 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 SDHBP21912 280 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 WARSP23381 471 aaKnown RBP6.55□□□□□ -1.36
MARK3-216ENST00000558953 CNR2P34972 360 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 ME1P48163 572 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 GPR15P49685 360 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 SATB1Q01826 763 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 TNK2Q07912 1038 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 EHHADHQ08426 723 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 RUNX3Q13761 415 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 PUM1Q14671 1186 aaKnown RBP eCLIP6.55□□□□□ -1.36
MARK3-216ENST00000558953 PSMD6Q15008 389 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 PON2Q15165 354 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 PDGFRLQ15198 375 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 MAPRE1Q15691 268 aaKnown RBP6.55□□□□□ -1.36
MARK3-216ENST00000558953 BMT2Q1RMZ1 405 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 SDHAF4Q5VUM1 108 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 RESP18Q5W5W9 173 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 LMBRD2Q68DH5 695 aaPredicted RBP6.55□□□□□ -1.36
MARK3-216ENST00000558953 TXNDC8Q6A555 127 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 SCARA3Q6AZY7 606 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 CC2D1AQ6P1N0 951 aaPredicted RBP6.55□□□□□ -1.36
MARK3-216ENST00000558953 FAM171BQ6P995 826 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 TXNDC11Q6PKC3 985 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 VSTM1Q6UX27 236 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 TRAPPC11Q7Z392 1133 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 LIMS2Q7Z4I7 341 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 DTX1Q86Y01 620 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 WFDC8Q8IUA0 241 aa6.55□□□□□ -1.36
MARK3-216ENST00000558953 SCN4BQ8IWT1 228 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms