RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 MYO5AQ9Y4I1 1855 aaKnown RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 NWD1Q149M9 1564 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 DIP2CQ9Y2E4 1556 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 MAST3O60307 1309 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 TARSL2A2RTX5 802 aaKnown RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 MYADML2A6NDP7 307 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 HIP1O00291 1037 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 CHUKO15111 745 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 SUV39H1O43463 412 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 ERN1O75460 977 aaKnown RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 URI1O94763 535 aaPredicted RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 MATN4O95460 622 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 YEATS4O95619 227 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 FTLP02792 175 aaPredicted RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 FTH1P19P0C7X4 201 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 HKR1P10072 659 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 GCFC2P16383 781 aaKnown RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 KCNA2P16389 499 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 ZNF18P17022 549 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 ZKSCAN1P17029 563 aaPredicted RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 ELF1P32519 619 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 RAB27AP51159 221 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 USP14P54578 494 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 BLOC1S1P78537 153 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 MC2RQ01718 297 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 GRIK3Q13003 919 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 DRP2Q13474 957 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 ZNF267Q14586 743 aaPredicted RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 CRYMQ14894 314 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 WHAMMP3Q1A5X7 153 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 PLEKHG6Q3KR16 790 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 DPCR1Q3MIW9 517 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 ATAT1Q5SQI0 421 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 ADALQ6DHV7 355 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 TTLL5Q6EMB2 1281 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 FAM173BQ6P4H8 233 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 HEATR3Q7Z4Q2 680 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 TICAM2Q86XR7 235 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 TEX11Q8IYF3 940 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 CFAP52Q8N1V2 620 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 FBXL16Q8N461 479 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 SLC44A3Q8N4M1 653 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 MAB21L3Q8N8X9 362 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 TC2NQ8N9U0 490 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 AFAP1L1Q8TED9 768 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 MRPS27Q92552 414 aaKnown RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 HPS3Q969F9 1004 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 RILPL2Q969X0 211 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 DHX58Q96C10 678 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 CABS1Q96KC9 395 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 Q96MF0 132 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 ZNF396Q96N95 335 aaPredicted RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 NAA15Q9BXJ9 866 aaKnown RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 IMPG2Q9BZV3 1241 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 CDH19Q9H159 772 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 BICC1Q9H694 974 aaKnown RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 FAM204AQ9H8W3 233 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 ALG13Q9NP73 1137 aaKnown RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 MAN1C1Q9NR34 630 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 INTS13Q9NVM9 706 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 RLIMQ9NVW2 624 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 BABAM1Q9NWV8 329 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 IFNKQ9P0W0 207 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 MYO1AQ9UBC5 1043 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 ABCF2Q9UG63 623 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 POLHQ9Y253 713 aa3.56□□□□□ -1.84
HERC1-203ENST00000558532 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.56□□□□□ -1.84
HERC1-203ENST00000558532 PTPRUQ92729 1446 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 PRAMEF33A0A0G2JMD5 474 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 E2F8A0AVK6 867 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 LRRIQ3A6PVS8 624 aaPredicted RBP3.55□□□□□ -1.84
HERC1-203ENST00000558532 GOLIM4O00461 696 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 NPHP1O15259 732 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 EIF3HO15372 352 aaKnown RBP eCLIP3.55□□□□□ -1.847e-7■■■□□ 16.9
HERC1-203ENST00000558532 PRAMEF10O60809 474 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 PFKFB2O60825 505 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 N4BP1O75113 896 aaKnown RBP3.55□□□□□ -1.84
HERC1-203ENST00000558532 RASSF9O75901 435 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 SUN1O94901 812 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 ARIH2O95376 493 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 LMNAP02545 664 aaKnown RBP3.55□□□□□ -1.84
HERC1-203ENST00000558532 ANXA1P04083 346 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 ALDH2P05091 517 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 GJB1P08034 283 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 EPB41P11171 864 aaKnown RBP3.55□□□□□ -1.84
HERC1-203ENST00000558532 TYRP14679 529 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 CPA1P15085 419 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 VCAM1P19320 739 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 LPOP22079 712 aaPredicted RBP3.55□□□□□ -1.84
HERC1-203ENST00000558532 MCM3P25205 808 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 ADRA1BP35368 520 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 MPLP40238 635 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 PBX1P40424 430 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 AVPR1BP47901 424 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 PIK3CGP48736 1102 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 EPHB1P54762 984 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 SLC8A3P57103 927 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 VSNL1P62760 191 aa3.55□□□□□ -1.84
HERC1-203ENST00000558532 POU6F2P78424 691 aaPredicted RBP3.55□□□□□ -1.84
HERC1-203ENST00000558532 NKX6-1P78426 367 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms