RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.55□□□□□ -0.4
HERC1-202ENST00000558324 RASAL2Q9UJF2 1139 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 COQ4Q9Y3A0 265 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.55□□□□□ -0.4
HERC1-202ENST00000558324 EP300Q09472 2414 aaPredicted RBP12.54□□□□□ -0.4
HERC1-202ENST00000558324 KIAA1549LQ6ZVL6 1849 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.54□□□□□ -0.4
HERC1-202ENST00000558324 NEDD8-MDP1E9PL57 170 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 TULP2O00295 520 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 KLF8O95600 359 aaPredicted RBP12.54□□□□□ -0.4
HERC1-202ENST00000558324 HMBSP08397 361 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 RALAP11233 206 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 TGM1P22735 817 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 PPP1R2P41236 205 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 DGKEP52429 567 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 SLC8A3P57103 927 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 YWHAEP62258 255 aaKnown RBP12.54□□□□□ -0.4
HERC1-202ENST00000558324 LMNB2Q03252 620 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 MORC3Q14149 939 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 CCDC6Q16204 474 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 SGO2Q562F6 1265 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 EMC10Q5UCC4 262 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 ARHGAP17Q68EM7 881 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 ANO7Q6IWH7 933 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 TPGS1Q6ZTW0 290 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 CACNA2D4Q7Z3S7 1137 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 GPR161Q8N6U8 529 aaKnown RBP12.54□□□□□ -0.4
HERC1-202ENST00000558324 BHMTQ93088 406 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 FAXDC2Q96IV6 333 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 TPSD1Q9BZJ3 242 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 DNMT3LQ9UJW3 386 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 LSM7Q9UK45 103 aaKnown RBP12.54□□□□□ -0.4
HERC1-202ENST00000558324 TSPAN16Q9UKR8 245 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
HERC1-202ENST00000558324 MMP17Q9ULZ9 603 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 INVSQ9Y283 1065 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 MYH10P35580 1976 aa12.54□□□□□ -0.4
HERC1-202ENST00000558324 CCDC163A0A0D9SF12 145 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 BICDL2A1A5D9 508 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 TBC1D3BA6NDS4 549 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 DCLK1O15075 740 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 TRIM24O15164 1050 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 HOXC11O43248 304 aaPredicted RBP12.53□□□□□ -0.4
HERC1-202ENST00000558324 GREM1O60565 184 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 TULP3O75386 442 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 TBXAS1P24557 533 aaPredicted RBP12.53□□□□□ -0.4
HERC1-202ENST00000558324 GBP1P32455 592 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 EIF2DP41214 584 aaKnown RBP12.53□□□□□ -0.4
HERC1-202ENST00000558324 GRIA2P42262 883 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 TKTL1P51854 596 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 BCAT1P54687 386 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 MRPS21P82921 87 aaKnown RBP12.53□□□□□ -0.4
HERC1-202ENST00000558324 PDE4CQ08493 712 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 EFEMP1Q12805 493 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 PAK1Q13153 545 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 CAMK4Q16566 473 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 C10orf76Q5T2E6 689 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 TMEM270Q6UE05 265 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 HTR3DQ70Z44 454 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 RSRC2Q7L4I2 434 aaKnown RBP12.53□□□□□ -0.4
HERC1-202ENST00000558324 DGLUCYQ7Z3D6 616 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 TADA2BQ86TJ2 420 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 ETFBKMTQ8IXQ9 262 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 PPM1KQ8N3J5 372 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 ANKRD52Q8NB46 1076 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 TXNDC5Q8NBS9 432 aaKnown RBP12.53□□□□□ -0.4
HERC1-202ENST00000558324 UBA3Q8TBC4 463 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 NDRG1Q92597 394 aaKnown RBP12.53□□□□□ -0.4
HERC1-202ENST00000558324 NT5C1BQ96P26 610 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 BBS2Q9BXC9 721 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 ULBP1Q9BZM6 244 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 SEMA4GQ9NTN9 838 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 DNAJC17Q9NVM6 304 aaKnown RBP12.53□□□□□ -0.4
HERC1-202ENST00000558324 DEC1Q9P2X7 70 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 HESX1Q9UBX0 185 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 CDV3Q9UKY7 258 aaKnown RBP12.53□□□□□ -0.4
HERC1-202ENST00000558324 PCDHB4Q9Y5E5 795 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 USP3Q9Y6I4 520 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 ATG2BQ96BY7 2078 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 FRYLO94915 3013 aa12.53□□□□□ -0.4
HERC1-202ENST00000558324 SGK1O00141 431 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 STC2O76061 302 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 CALCAP01258 141 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 TYRP14679 529 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 HNRNPLP14866 589 aaKnown RBP eCLIP12.52□□□□□ -0.41
HERC1-202ENST00000558324 PLA2G4AP47712 749 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 PSEN1P49768 467 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 YWHAGP61981 247 aaKnown RBP eCLIP12.52□□□□□ -0.41
HERC1-202ENST00000558324 ADIGQ0VDE8 80 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 PUM1Q14671 1186 aaKnown RBP eCLIP12.52□□□□□ -0.41
HERC1-202ENST00000558324 CRY1Q16526 586 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 KLHDC10Q6PID8 442 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 RRAGAQ7L523 313 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 ERMP1Q7Z2K6 904 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 PHTF2Q8N3S3 785 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 UBR7Q8N806 425 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 IL17RCQ8NAC3 791 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 KAT5Q92993 513 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 ARRDC1-AS1Q9H2J1 176 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms