RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 YWHAGP61981 247 aaKnown RBP eCLIP12.98□□□□□ -0.33
TPM1-209ENST00000558072 SLC25A52Q3SY17 297 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 SNX30Q5VWJ9 437 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 BSPRYQ5W0U4 402 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 STRADAQ7RTN6 431 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 PEX26Q7Z412 305 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 UBL4BQ8N7F7 174 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 CMASQ8NFW8 434 aaPredicted RBP12.98□□□□□ -0.33
TPM1-209ENST00000558072 SLC2A13Q96QE2 648 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 DDX23Q9BUQ8 820 aaKnown RBP12.98□□□□□ -0.33
TPM1-209ENST00000558072 APOL5Q9BWW9 433 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 OSGEPQ9NPF4 335 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 MTCH2Q9Y6C9 303 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 MYO7AQ13402 2215 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 CCDC66A2RUB6 948 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 CTAGE9A4FU28 777 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 ATMINO43313 823 aaPredicted RBP12.97□□□□□ -0.33
TPM1-209ENST00000558072 PALMO75781 387 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 MOCS3O95396 460 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 GLP2RO95838 553 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 KRT7P08729 469 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 SLC2A3P11169 496 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 HOXB8P17481 243 aaPredicted RBP12.97□□□□□ -0.33
TPM1-209ENST00000558072 PTPN2P17706 415 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 ATF6P18850 670 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 POU3F3P20264 500 aaPredicted RBP12.97□□□□□ -0.33
TPM1-209ENST00000558072 DDX6P26196 483 aaKnown RBP eCLIP12.97□□□□□ -0.33
TPM1-209ENST00000558072 CASQ1P31415 396 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 RFC1P35251 1148 aaPredicted RBP12.97□□□□□ -0.33
TPM1-209ENST00000558072 RNASE9P60153 205 aaKnown RBP12.97□□□□□ -0.33
TPM1-209ENST00000558072 HYAL1Q12794 435 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 TAF10Q12962 218 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 MESDQ14696 234 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 CCDC85BQ15834 202 aaPredicted RBP12.97□□□□□ -0.33
TPM1-209ENST00000558072 ODF2Q5BJF6 829 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 LRRC38Q5VT99 294 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 KLHDC10Q6PID8 442 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 NYAP1Q6ZVC0 841 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 RSRC2Q7L4I2 434 aaKnown RBP12.97□□□□□ -0.33
TPM1-209ENST00000558072 DNAJB7Q7Z6W7 309 aaPredicted RBP12.97□□□□□ -0.33
TPM1-209ENST00000558072 SLFN11Q7Z7L1 901 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 KIF18AQ8NI77 898 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 SCAMP5Q8TAC9 235 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 GIPC2Q8TF65 315 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 RXFP2Q8WXD0 754 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 PGAP3Q96FM1 320 aaPredicted RBP12.97□□□□□ -0.33
TPM1-209ENST00000558072 GAS2L1Q99501 681 aaPredicted RBP12.97□□□□□ -0.33
TPM1-209ENST00000558072 CDX2Q99626 313 aaPredicted RBP12.97□□□□□ -0.33
TPM1-209ENST00000558072 SFXN1Q9H9B4 322 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 MAN1C1Q9NR34 630 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 ASAH2Q9NR71 780 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 TJP2Q9UDY2 1190 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 DUSP10Q9Y6W6 482 aa12.97□□□□□ -0.33
TPM1-209ENST00000558072 MYO16Q9Y6X6 1858 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 USP27XA6NNY8 438 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 PIK3R2O00459 728 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 NRG2O14511 850 aaPredicted RBP12.96□□□□□ -0.33
TPM1-209ENST00000558072 BUB1BO60566 1050 aaPredicted RBP12.96□□□□□ -0.33
TPM1-209ENST00000558072 PAPLNO95428 1278 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 ZDHHC11BP0C7U3 371 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 NCAM1P13591 858 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 ZNF135P52742 658 aaPredicted RBP12.96□□□□□ -0.33
TPM1-209ENST00000558072 IFRD2Q12894 506 aaPredicted RBP12.96□□□□□ -0.33
TPM1-209ENST00000558072 NNTQ13423 1086 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 ARL13BQ3SXY8 428 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 ARHGAP15Q53QZ3 475 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 BOLA3Q53S33 107 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 C2CD6Q53TS8 623 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 DCAF6Q58WW2 860 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 TMEM184AQ6ZMB5 413 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 GPRIN1Q7Z2K8 1008 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 POLNQ7Z5Q5 900 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 PSTKQ8IV42 348 aaKnown RBP12.96□□□□□ -0.33
TPM1-209ENST00000558072 RHOT1Q8IXI2 618 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 DEFB106AQ8N104 65 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 DEFB123Q8N688 67 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 EFHBQ8N7U6 833 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 C12orf76Q8N812 135 aaPredicted RBP12.96□□□□□ -0.33
TPM1-209ENST00000558072 PPM1EQ8WY54 764 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 MRPS31Q92665 395 aaKnown RBP12.96□□□□□ -0.33
TPM1-209ENST00000558072 SERPINB11Q96P15 392 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 TBCBQ99426 244 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 NAPGQ99747 312 aaPredicted RBP12.96□□□□□ -0.33
TPM1-209ENST00000558072 PRKD2Q9BZL6 878 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 DDX56Q9NY93 547 aaKnown RBP12.96□□□□□ -0.33
TPM1-209ENST00000558072 SLC12A6Q9UHW9 1150 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 MAGED2Q9UNF1 606 aaPredicted RBP12.96□□□□□ -0.33
TPM1-209ENST00000558072 COG5Q9UP83 839 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 HCFC2Q9Y5Z7 792 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 ALG6Q9Y672 507 aa12.96□□□□□ -0.33
TPM1-209ENST00000558072 GRID2IPA4D2P6 1211 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 YJEFN3A6XGL0 299 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 E7ENQ6 273 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 PSTPIP1O43586 416 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 PRPSAP2O60256 369 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 RFPL2O75678 378 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 TNNT1P13805 278 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 PRLRP16471 622 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 HMGA1P17096 107 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms