RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 FMO1Q01740 532 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 NNTQ13423 1086 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 ARID5BQ14865 1188 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 PDGFRLQ15198 375 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 ASIC2Q16515 512 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 STXBP5Q5T5C0 1151 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 BSPRYQ5W0U4 402 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 SCD5Q86SK9 330 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 CNGA4Q8IV77 575 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 WDTC1Q8N5D0 677 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 ARL14EPQ8N8R7 260 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-234ENST00000557703 OR8K1Q8NGG5 319 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 EXOC4Q96A65 974 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 C18orf8Q96DM3 657 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 AGPAT1Q99943 283 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 DCLK3Q9C098 648 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 RNF38Q9H0F5 515 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 RBSNQ9H1K0 784 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 CD320Q9NPF0 282 aa14.35□□□□□ -0.11
SHMT2-234ENST00000557703 F5P12259 2224 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 HSF2BPO75031 334 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 GYPCP04921 128 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 SERPING1P05155 500 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 MMEP08473 750 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 MBL2P11226 248 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-234ENST00000557703 UNGP13051 313 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-234ENST00000557703 NSFP46459 744 aaKnown RBP14.34□□□□□ -0.11
SHMT2-234ENST00000557703 RGS7P49802 495 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 GSCP56915 257 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-234ENST00000557703 NOMO3P69849 1222 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 CENPCQ03188 943 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 SIGLEC14Q08ET2 396 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 KLHL30Q0D2K2 578 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 USP4Q13107 963 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 ZNF77Q15935 545 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 C10orf120Q5SQS8 335 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 MSANTD2Q6P1R3 559 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 POTEHQ6S545 545 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 VITQ6UXI7 678 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 RSRC2Q7L4I2 434 aaKnown RBP14.34□□□□□ -0.11
SHMT2-234ENST00000557703 SLC26A9Q7LBE3 791 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 GAS2L3Q86XJ1 694 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 SCUBE3Q8IX30 993 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 SHDQ96IW2 340 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 NECAB3Q96P71 396 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-234ENST00000557703 CPXM1Q96SM3 734 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 CYP2S1Q96SQ9 504 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 IRX2Q9BZI1 471 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-234ENST00000557703 BRD9Q9H8M2 597 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 POPDC2Q9HBU9 364 aa14.34□□□□□ -0.11
SHMT2-234ENST00000557703 ZNHIT6Q9NWK9 470 aaKnown RBP14.34□□□□□ -0.11
SHMT2-234ENST00000557703 HBS1LQ9Y450 684 aaKnown RBP14.34□□□□□ -0.11
SHMT2-234ENST00000557703 YJEFN3A6XGL0 299 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 E5RJQ4 531 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 E7ENQ6 273 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 NRG2O14511 850 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-234ENST00000557703 PAPSS1O43252 624 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-234ENST00000557703 PRAMEF12O95522 483 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 CALB1P05937 261 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 CHRNB2P17787 502 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 TNFAIP3P21580 790 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 MMP8P22894 467 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 SLC6A3Q01959 620 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 ARID5AQ03989 594 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
SHMT2-234ENST00000557703 NR1H3Q13133 447 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 ACBD5Q5T8D3 534 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-234ENST00000557703 HTR3DQ70Z44 454 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 BHLHA9Q7RTU4 235 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 PHF13Q86YI8 300 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-234ENST00000557703 OSCP1Q8WVF1 389 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 DNAJC7Q99615 494 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 KXD1Q9BQD3 176 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 FAM83CQ9BQN1 747 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 SYT11Q9BT88 431 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 KLF16Q9BXK1 252 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-234ENST00000557703 C8orf33Q9H7E9 229 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-234ENST00000557703 CCSER2Q9H7U1 834 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 CYTH4Q9UIA0 394 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 MUTYHQ9UIF7 546 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 CPQQ9Y646 472 aa14.33□□□□□ -0.12
SHMT2-234ENST00000557703 LEFTY2O00292 366 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 CAPN9O14815 690 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 GABBR2O75899 941 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 LATS1O95835 1130 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 CALCAP01258 141 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 ASGR2P07307 311 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 CFHP08603 1231 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 CASP14P31944 242 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 VIPR2P41587 438 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 CDK17Q00537 523 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 PRKCQQ04759 706 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 RING1Q06587 406 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 MTF1Q14872 753 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 CLEC16AQ2KHT3 1053 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 PTPN20Q4JDL3 420 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 TAF3Q5VWG9 929 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 PASD1Q8IV76 773 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 UNC45BQ8IWX7 931 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 SH3RF2Q8TEC5 729 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms