RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 K7EQS6 105 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 TRIM66O15016 1216 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 PMM2O15305 246 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 AFPP02771 609 aaKnown RBP17.59■□□□□ 0.41
NEK9-211ENST00000557673 FAM163BP0C2L3 166 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 PTPN1P18031 435 aaKnown RBP17.59■□□□□ 0.41
NEK9-211ENST00000557673 NOP14P78316 857 aaKnown RBP17.59■□□□□ 0.41
NEK9-211ENST00000557673 KCNJ12Q14500 433 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 HSF5Q4G112 596 aaPredicted RBP17.59■□□□□ 0.41
NEK9-211ENST00000557673 ANO7Q6IWH7 933 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 TAF4BQ92750 862 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 SEMA4DQ92854 862 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 TPSD1Q9BZJ3 242 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 IMPG2Q9BZV3 1241 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 INVSQ9Y283 1065 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 EML5Q05BV3 1969 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 LAMA1P25391 3075 aa17.58■□□□□ 0.41
NEK9-211ENST00000557673 LEFTY2O00292 366 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 CSRP1P21291 193 aaKnown RBP17.58■□□□□ 0.4
NEK9-211ENST00000557673 EEF1GP26641 437 aaKnown RBP17.58■□□□□ 0.4
NEK9-211ENST00000557673 OPRD1P41143 372 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 MTIF2P46199 727 aaKnown RBP17.58■□□□□ 0.4
NEK9-211ENST00000557673 ZNF165P49910 485 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 SEC13P55735 322 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 SLC7A9P82251 487 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 ZNF252P-AS1Q0IIN9 211 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 KCNH2Q12809 1159 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 LMAN2Q12907 356 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 BYSLQ13895 437 aaKnown RBP17.58■□□□□ 0.4
NEK9-211ENST00000557673 CRY1Q16526 586 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 MAN2A1Q16706 1144 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 SGSM1Q2NKQ1 1148 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 SH3PXD2AQ5TCZ1 1133 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 SPOPLQ6IQ16 392 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 DHX40Q8IX18 779 aaKnown RBP17.58■□□□□ 0.4
NEK9-211ENST00000557673 B3GALNT2Q8NCR0 500 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 SPACA7Q96KW9 195 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 ZNF518BQ9C0D4 1074 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 HSD3B7Q9H2F3 369 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 APOBEC3GQ9HC16 384 aaKnown RBP17.58■□□□□ 0.4
NEK9-211ENST00000557673 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.58■□□□□ 0.4
NEK9-211ENST00000557673 RAB20Q9NX57 234 aa17.58■□□□□ 0.4
NEK9-211ENST00000557673 CLDN5O00501 218 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 P4HA2O15460 535 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 MAP3K13O43283 966 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 ZNF18P17022 549 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 EIF2DP41214 584 aaKnown RBP17.57■□□□□ 0.4
NEK9-211ENST00000557673 DPP6P42658 865 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 ASPAP45381 313 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 DHPSP49366 369 aaPredicted RBP17.57■□□□□ 0.4
NEK9-211ENST00000557673 CACNA2D1P54289 1103 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 USP46P62068 366 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 TCP11X2Q5H9J9 407 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 SPDYCQ5MJ68 293 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 UNQ6494/PRO21346Q6UXR6 183 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 LPCAT2Q7L5N7 544 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 DDX42Q86XP3 938 aaKnown RBP eCLIP17.57■□□□□ 0.4
NEK9-211ENST00000557673 ADGRG2Q8IZP9 1017 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 PNKPQ96T60 521 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 TTLL2Q9BWV7 592 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 B3GNT5Q9BYG0 378 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 NIF3L1Q9GZT8 377 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 POLMQ9NP87 494 aaPredicted RBP17.57■□□□□ 0.4
NEK9-211ENST00000557673 TMEM30AQ9NV96 361 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 FANCLQ9NW38 375 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 ANAPC1Q9H1A4 1944 aa17.57■□□□□ 0.4
NEK9-211ENST00000557673 ZNF840PA6NDX5 716 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.56■□□□□ 0.4
NEK9-211ENST00000557673 F8VP50 259 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 ADH1CP00326 375 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 CYP17A1P05093 508 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 P4HA1P13674 534 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 FOXC1Q12948 553 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 ORC1Q13415 861 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 PREPLQ4J6C6 727 aaPredicted RBP17.56■□□□□ 0.4
NEK9-211ENST00000557673 MIIPQ5JXC2 388 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 TTC30AQ86WT1 665 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 CREBRFQ8IUR6 639 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 CCDC33Q8N5R6 958 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 CCDC150Q8NCX0 1101 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 MDGA1Q8NFP4 955 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 WHAMMQ8TF30 809 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 PIGKQ92643 395 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 C8orf48Q96LL4 319 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 SLITRK1Q96PX8 696 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 TUBGCP2Q9BSJ2 902 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 NUSAP1Q9BXS6 441 aaKnown RBP17.56■□□□□ 0.4
NEK9-211ENST00000557673 ELOVL4Q9GZR5 314 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 TBC1D14Q9P2M4 693 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 HMGXB4Q9UGU5 601 aa17.56■□□□□ 0.4
NEK9-211ENST00000557673 EVLQ9UI08 416 aaPredicted RBP17.56■□□□□ 0.4
NEK9-211ENST00000557673 TMEM8BA6NDV4 472 aa17.55■□□□□ 0.4
NEK9-211ENST00000557673 TNFRSF10BO14763 440 aa17.55■□□□□ 0.4
NEK9-211ENST00000557673 GIPC1O14908 333 aa17.55■□□□□ 0.4
NEK9-211ENST00000557673 ABL1P00519 1130 aa17.55■□□□□ 0.4
NEK9-211ENST00000557673 APODP05090 189 aa17.55■□□□□ 0.4
NEK9-211ENST00000557673 PRKCSHP14314 528 aaPredicted RBP17.55■□□□□ 0.4
NEK9-211ENST00000557673 GRIA2P42262 883 aa17.55■□□□□ 0.4
NEK9-211ENST00000557673 IRX4P78413 519 aa17.55■□□□□ 0.4
NEK9-211ENST00000557673 IQCB1Q15051 598 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms