RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CAPSQ13938 189 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 PDCD2Q16342 344 aaPredicted RBP12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 ARCQ7LC44 396 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 NDUFAF2Q8N183 169 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 SLC4A11Q8NBS3 891 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 AZIN2Q96A70 460 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 KLC2Q9H0B6 622 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 PCMTD2Q9NV79 361 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 THAP1Q9NVV9 213 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 ZBTB12Q9Y330 459 aaPredicted RBP12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 SDR42E2A6NKP2 422 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 KCNN4O15554 427 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 FAM189A1O60320 539 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 TOM1L1O75674 476 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 USP1O94782 785 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 ENDOD1O94919 500 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 ERBB2P04626 1255 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 AOC1P19801 751 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 CRHR1P34998 444 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 CDK7P50613 346 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 UBAP2LQ14157 1087 aaKnown RBP12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 EFHC1Q5JVL4 640 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 C1orf228Q6PIY5 440 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 WDR75Q8IWA0 830 aaKnown RBP12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 ST13P4Q8IZP2 240 aaPredicted RBP12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 FLAD1Q8NFF5 587 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 PPP1R14CQ8TAE6 165 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 LRRC39Q96DD0 335 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 OLFM3Q96PB7 478 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 MRPL4Q9BYD3 311 aaKnown RBP12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 SDCBP2Q9H190 292 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 VCX3BQ9H321 246 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 USP29Q9HBJ7 922 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 S100A14Q9HCY8 104 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 VCX3AQ9NNX9 186 aa12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.26□□□□□ -0.45
VIPAS39-211ENST00000557658 A0A088AWK7 358 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 ARHGAP42A6NI28 874 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 OGTO15294 1046 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 BUD23O43709 281 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 TNNC2P02585 160 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 SERPINB9P50453 376 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 MTMR2Q13614 643 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 HNRNPDQ14103 355 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 DBN1Q16643 649 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 SNRNP48Q6IEG0 339 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 ACAD11Q709F0 780 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 SLC25A41Q8N5S1 370 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 STKLD1Q8NE28 680 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 AKT1S1Q96B36 256 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 RTP4Q96DX8 246 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 SPATA16Q9BXB7 569 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 SMYD2Q9NRG4 433 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 ZDHHC7Q9NXF8 308 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 NXF1Q9UBU9 619 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 SLC4A7Q9Y6M7 1214 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 UGT1A9O60656 530 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 KLHL2O95198 593 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 ITGBL1O95965 494 aaPredicted RBP12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 C6orf222P0C671 652 aaPredicted RBP12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 CSH1P0DML2 217 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 CSH2P0DML3 217 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 CPOXP36551 454 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 EFNA5P52803 228 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 CNPY1Q3B7I2 92 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 LIN52Q52LA3 116 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 MEX3CQ5U5Q3 659 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 RAPH1Q70E73 1250 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 DHDDSQ86SQ9 333 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 CAND1Q86VP6 1230 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 RASSF3Q86WH2 238 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 EGFL6Q8IUX8 553 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 MTMR14Q8NCE2 650 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 GSTCDQ8NEC7 633 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 OR6Y1Q8NGX8 325 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 FAM172AQ8WUF8 416 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 MCRS1Q96EZ8 462 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 WNK4Q96J92 1243 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 PEBP4Q96S96 227 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 EBF4Q9BQW3 602 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 ADPGKQ9BRR6 497 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 NIFKQ9BYG3 293 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 XYLT2Q9H1B5 865 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 UGT1A7Q9HAW7 530 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 UGT1A10Q9HAW8 530 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 UGT1A8Q9HAW9 530 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 XAB2Q9HCS7 855 aaKnown RBP12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 ETNK2Q9NVF9 386 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 SLC15A5A6NIM6 579 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 TTLL13PA6NNM8 815 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 MEI4A8MW99 385 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 ZBED1O96006 694 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 APRTP07741 180 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 ZNF143P52747 638 aaPredicted RBP12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 KRT81Q14533 505 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 CFAP157Q5JU67 520 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 FAXCQ5TGI0 409 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 MROH9Q5TGP6 573 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 UNC5AQ6ZN44 842 aa12.25□□□□□ -0.45
VIPAS39-211ENST00000557658 PDSS2Q86YH6 399 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms