RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 SLC6A4P31645 630 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 MLLT6P55198 1093 aaPredicted RBP5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 SRSF3P84103 164 aaKnown RBP5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 SETQ01105 290 aaPredicted RBP5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 APBA1Q02410 837 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 SP3Q02447 781 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 TRPC3Q13507 836 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 ITPK1Q13572 414 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 CUL4BQ13620 913 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 SLC29A2Q14542 456 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 ARHGEF6Q15052 776 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 DLGAP5Q15398 846 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 MAPKAPK3Q16644 382 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 CRB2Q5IJ48 1285 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 FAM47AQ5JRC9 791 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 TMTC4Q5T4D3 741 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 CCDC30Q5VVM6 783 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 OTUD7BQ6GQQ9 843 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 C16orf54Q6UWD8 224 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 LCNL1Q6ZST4 164 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 UBE3BQ7Z3V4 1068 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 HERC6Q8IVU3 1022 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 AOPEPQ8N6M6 819 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 KYQ8NBH2 561 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 OR1N1Q8NGS0 311 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 U2AF1L4Q8WU68 220 aaKnown RBP5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 HERVK_113Q902F9 699 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 CFHR4Q92496 578 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 HTRA1Q92743 480 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 ATOH1Q92858 354 aaPredicted RBP5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 SLC7A6OSQ96CW6 309 aaPredicted RBP5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 NOX5Q96PH1 765 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 KCNC2Q96PR1 638 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 NELL2Q99435 816 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 BARD1Q99728 777 aaKnown RBP5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 MRI1Q9BV20 369 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 SEPSECSQ9HD40 501 aaKnown RBP5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 CD320Q9NPF0 282 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 USP40Q9NVE5 1235 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 RLIMQ9NVW2 624 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 JKAMPQ9P055 326 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 NCDNQ9UBB6 729 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 XPR1Q9UBH6 696 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 MTO1Q9Y2Z2 717 aaKnown RBP5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 CTDP1Q9Y5B0 961 aaPredicted RBP5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 HS3ST4Q9Y661 456 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 CPSF1Q10570 1443 aaKnown RBP5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 CACNA1HO95180 2353 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 COL4A6Q14031 1691 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 RGPD5Q99666 1765 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 KRTAP9-7A8MTY7 169 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 FAM155BO75949 473 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ACTL6BO94805 426 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 CCL5P13501 91 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ALADP13716 330 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 NPPBP16860 134 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 PFKLP17858 780 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 EGR1P18146 543 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ACVR2AP27037 513 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 CST5P28325 142 aaPredicted RBP5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 TM4SF1P30408 202 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ZNF135P52742 658 aaPredicted RBP5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 PRKAA2P54646 552 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 RRADP55042 308 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 POLE2P56282 527 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 BPIFB4P59827 614 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 PTH1RQ03431 593 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 TLE2Q04725 743 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 TCF15Q12870 199 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 SURF1Q15526 300 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 AGAP9Q5VTM2 703 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 RAP1GAP2Q684P5 730 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ITPRIPL1Q6GPH6 555 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ZNF529Q6P280 563 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 KIAA0408Q6ZU52 694 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 SEM1Q6ZVN7 128 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ZNF365Q70YC5 407 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ZNF605Q86T29 641 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 USP37Q86T82 979 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 IRF2BP1Q8IU81 584 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 FBXO15Q8NCQ5 510 aaPredicted RBP5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ZNF384Q8TF68 577 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 UCMAQ8WVF2 138 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ZCCHC14Q8WYQ9 949 aaKnown RBP5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ZBTB8AQ96BR9 441 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 RRP36Q96EU6 259 aaKnown RBP5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 COG8Q96MW5 612 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 PRAM1Q96QH2 718 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 NDC1Q9BTX1 674 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 KIAA1683Q9H0B3 1180 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 PLEKHA5Q9HAU0 1116 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 SIRT5Q9NXA8 310 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ASAP1Q9ULH1 1129 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 AGAP1Q9UPQ3 857 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 CNOT1A5YKK6 2376 aaKnown RBP5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 ADGRB1O14514 1584 aa5.53□□□□□ -1.52
MTHFD1-216ENST00000557539 KALRNO60229 2985 aa5.52□□□□□ -1.53
MTHFD1-216ENST00000557539 ALPK3Q96L96 1907 aa5.52□□□□□ -1.53
MTHFD1-216ENST00000557539 FAM205AQ6ZU69 1335 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms