RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SASH3O75995 380 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 UPP2O95045 317 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 OR4Q2P0C623 313 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 RDXP35241 583 aaKnown RBP13.01□□□□□ -0.33
SHMT2-233ENST00000557529 AIF1P55008 147 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 KRT17Q04695 432 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 ADCY2Q08462 1091 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 GPS2Q13227 327 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 PTK6Q13882 451 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 BYSLQ13895 437 aaKnown RBP13.01□□□□□ -0.33
SHMT2-233ENST00000557529 DPYSL3Q14195 570 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 TRADDQ15628 312 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 DPYSL2Q16555 572 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 RAB6CQ53S08 254 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 MFSD5Q6N075 450 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 ZNF365Q70YC5 407 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 BNIPLQ7Z465 357 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 DDX42Q86XP3 938 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHMT2-233ENST00000557529 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-233ENST00000557529 NDRG1Q92597 394 aaKnown RBP13.01□□□□□ -0.33
SHMT2-233ENST00000557529 TOP1MTQ969P6 601 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 VWCEQ96DN2 955 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 C8orf48Q96LL4 319 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 SLC9A7Q96T83 725 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 ZNF670Q9BS34 389 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 TTPALQ9BTX7 342 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 TRIM31Q9BZY9 425 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 RAB6CQ9H0N0 254 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 PRDM16Q9HAZ2 1276 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 PCDH18Q9HCL0 1135 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 PRDM5Q9NQX1 630 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-233ENST00000557529 ABI2Q9NYB9 513 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-233ENST00000557529 OGFRQ9NZT2 677 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 MICAL3Q7RTP6 2002 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 CENPFP49454 3210 aa13.01□□□□□ -0.33
SHMT2-233ENST00000557529 TRIM43BA6NCK2 446 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 APOC4-APOC2K7ER74 178 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 M0QYT0 321 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 BAIAP3O94812 1187 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 F9P00740 461 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 APOC2P02655 101 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 ITGAVP06756 1048 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 CD48P09326 243 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 HSPA1AP0DMV8 641 aaKnown RBP13□□□□□ -0.33
SHMT2-233ENST00000557529 HSPA1BP0DMV9 641 aaKnown RBP13□□□□□ -0.33
SHMT2-233ENST00000557529 TFE3P19532 575 aaPredicted RBP13□□□□□ -0.33
SHMT2-233ENST00000557529 CYP2F1P24903 491 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 ECHS1P30084 290 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 CDR1P51861 262 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 VCPP55072 806 aaKnown RBP13□□□□□ -0.33
SHMT2-233ENST00000557529 DEUP1Q05D60 604 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 CALCOCO2Q13137 446 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 HFE2Q6ZVN8 426 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 SCN4BQ8IWT1 228 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 MREGQ8N565 214 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 CCDC89Q8N998 374 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 BBOF1Q8ND07 529 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 C2orf15Q8WU43 125 aaKnown RBP13□□□□□ -0.33
SHMT2-233ENST00000557529 TRIM43Q96BQ3 446 aaPredicted RBP13□□□□□ -0.33
SHMT2-233ENST00000557529 LRRC45Q96CN5 670 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 FAF2Q96CS3 445 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 PGAP3Q96FM1 320 aaPredicted RBP13□□□□□ -0.33
SHMT2-233ENST00000557529 RNF157Q96PX1 679 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 TMEM51Q9NW97 253 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 WHRNQ9P202 907 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 RCOR3Q9P2K3 495 aaPredicted RBP13□□□□□ -0.33
SHMT2-233ENST00000557529 HCSTQ9UBK5 93 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 AP4E1Q9UPM8 1137 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 NAALADL1Q9UQQ1 740 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 ZNF148Q9UQR1 794 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 SNX24Q9Y343 169 aa13□□□□□ -0.33
SHMT2-233ENST00000557529 TNFRSF10BO14763 440 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 APOL1O14791 398 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 TBC1D4O60343 1298 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 FYNP06241 537 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 NCAM1P13591 858 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 CPB1P15086 417 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 CSF2RAP15509 400 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 ZFXP17010 805 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-233ENST00000557529 TGM2P21980 687 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 L1CAMP32004 1257 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 RABGGTBP53611 331 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 SLC5A3P53794 718 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 DYNLT1P63172 113 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 CAV1Q03135 178 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 GPR17Q13304 367 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 USP41Q3LFD5 358 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 ANKRD20A8PQ5CZ79 823 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 ZC3H12AQ5D1E8 599 aaKnown RBP12.99□□□□□ -0.33
SHMT2-233ENST00000557529 OTUD1Q5VV17 481 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-233ENST00000557529 SYPL2Q5VXT5 272 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 BSPRYQ5W0U4 402 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 BHLHA9Q7RTU4 235 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 GSTA5Q7RTV2 222 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 CMTR2Q8IYT2 770 aaKnown RBP12.99□□□□□ -0.33
SHMT2-233ENST00000557529 SLC35B2Q8TB61 432 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 ACTL9Q8TC94 416 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 SPPL2BQ8TCT7 592 aa12.99□□□□□ -0.33
SHMT2-233ENST00000557529 NTAN1Q96AB6 310 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms