RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 DMAP1Q9NPF5 467 aaPredicted RBP14.92□□□□□ -0.02
SLIRP-210ENST00000557431 DNAJC17Q9NVM6 304 aaKnown RBP14.92□□□□□ -0.02
SLIRP-210ENST00000557431 OSER1Q9NX31 292 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 DEC1Q9P2X7 70 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 MORC2Q9Y6X9 1032 aaPredicted RBP14.92□□□□□ -0.02
SLIRP-210ENST00000557431 KNL1Q8NG31 2342 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 UBE4BO95155 1302 aa14.92□□□□□ -0.02
SLIRP-210ENST00000557431 IGHV1OR15-9A0A0B4J2B8 117 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 A0A1W2PQF6 199 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 WASH3PC4AMC7 463 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 PRRT4C9JH25 899 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 POLR2DO15514 142 aaKnown RBP14.91□□□□□ -0.02
SLIRP-210ENST00000557431 HOXC11O43248 304 aaPredicted RBP14.91□□□□□ -0.02
SLIRP-210ENST00000557431 TLR5O60602 858 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 EXOC3O60645 756 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 STAU1O95793 577 aaKnown RBP14.91□□□□□ -0.02
SLIRP-210ENST00000557431 NDUFV2P19404 249 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 LMAN2Q12907 356 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 HSF5Q4G112 596 aaPredicted RBP14.91□□□□□ -0.02
SLIRP-210ENST00000557431 SLC2A14Q8TDB8 520 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 SYAP1Q96A49 352 aaPredicted RBP14.91□□□□□ -0.02
SLIRP-210ENST00000557431 SMARCD1Q96GM5 515 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 CAMK1GQ96NX5 476 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 PLK2Q9NYY3 685 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 ATP8B3O60423 1300 aa14.91□□□□□ -0.02
SLIRP-210ENST00000557431 SRRM3A6NNA2 597 aaPredicted RBP14.9□□□□□ -0.02
SLIRP-210ENST00000557431 CYP26A1O43174 497 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 GREM1O60565 184 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 C4BPAP04003 597 aaKnown RBP14.9□□□□□ -0.02
SLIRP-210ENST00000557431 ZDHHC11BP0C7U3 371 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 MAOBP27338 520 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 NTSR1P30989 418 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 ATICP31939 592 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 NDST1P52848 882 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 ZNF33AQ06730 810 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 SEMA3BQ13214 749 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 NCOA4Q13772 614 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 GRAMD4Q6IC98 578 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 PIP4P1Q86T03 277 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 MINDY1Q8N5J2 469 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 KDF1Q8NAX2 398 aaPredicted RBP14.9□□□□□ -0.02
SLIRP-210ENST00000557431 OVCA2Q8WZ82 227 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 HSPA12BQ96MM6 686 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 TWNKQ96RR1 684 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 BBS2Q9BXC9 721 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 LRRC27Q9C0I9 530 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 ZSCAN16Q9H4T2 348 aaPredicted RBP14.9□□□□□ -0.02
SLIRP-210ENST00000557431 NMUR1Q9HB89 426 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 CACNA2D2Q9NY47 1150 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 IL37Q9NZH6 218 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 SPEGQ15772 3267 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 GOLGA4Q13439 2230 aaKnown RBP14.9□□□□□ -0.02
SLIRP-210ENST00000557431 PLXNA2O75051 1894 aa14.9□□□□□ -0.02
SLIRP-210ENST00000557431 NYNRINQ9P2P1 1898 aaKnown RBP14.9□□□□□ -0.02
SLIRP-210ENST00000557431 AP5Z1O43299 807 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 CUTAO60888 179 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 PPP6R2O75170 966 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 TYRP14679 529 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 ATXN3P54252 364 aaPredicted RBP14.89□□□□□ -0.03
SLIRP-210ENST00000557431 AMPD3Q01432 767 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 COL9A2Q14055 689 aaPredicted RBP14.89□□□□□ -0.03
SLIRP-210ENST00000557431 KNOP1Q1ED39 458 aaKnown RBP14.89□□□□□ -0.03
SLIRP-210ENST00000557431 DUOXA1Q1HG43 343 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 SNX30Q5VWJ9 437 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 PEAR1Q5VY43 1037 aaPredicted RBP14.89□□□□□ -0.03
SLIRP-210ENST00000557431 CHPFQ8IZ52 775 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 CHCHD4Q8N4Q1 142 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 KIAA1958Q8N8K9 716 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 IQUBQ8NA54 791 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 KIAA0895Q8NCT3 520 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 PARD3BQ8TEW8 1205 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 IPO4Q8TEX9 1081 aaKnown RBP14.89□□□□□ -0.03
SLIRP-210ENST00000557431 OTUB2Q96DC9 234 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 KLF16Q9BXK1 252 aaPredicted RBP14.89□□□□□ -0.03
SLIRP-210ENST00000557431 CUEDC2Q9H467 287 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 SLC32A1Q9H598 525 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 CAPN10Q9HC96 672 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 CD248Q9HCU0 757 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 SLC6A14Q9UN76 642 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 CABIN1Q9Y6J0 2220 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 ZFYVE26Q68DK2 2539 aa14.89□□□□□ -0.03
SLIRP-210ENST00000557431 BAHCC1Q9P281 2608 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 A0A1W2PQH9 124 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 FAM92AA1XBS5 289 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 FAM163BP0C2L3 166 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 BMT2Q1RMZ1 405 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 CNNM4Q6P4Q7 775 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 KIAA1324Q6UXG2 1013 aaKnown RBP14.88□□□□□ -0.03
SLIRP-210ENST00000557431 CACUL1Q86Y37 369 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 RGL4Q8IZJ4 473 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 HDDC3Q8N4P3 179 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 TRIML1Q8N9V2 468 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 SPRYD3Q8NCJ5 442 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 TNIP3Q96KP6 325 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 VRTNQ9H8Y1 702 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 SERTAD1Q9UHV2 236 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 MUC22E2RYF6 1773 aaPredicted RBP14.88□□□□□ -0.03
SLIRP-210ENST00000557431 DOCK9Q9BZ29 2069 aa14.88□□□□□ -0.03
SLIRP-210ENST00000557431 PKD1L2Q7Z442 2459 aa14.87□□□□□ -0.03
SLIRP-210ENST00000557431 HHLA1C9JL84 531 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms