RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 TWNKQ96RR1 684 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 KLF16Q9BXK1 252 aaPredicted RBP16.78■□□□□ 0.28
TUBB3-213ENST00000557262 DNAI2Q9GZS0 605 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 APOBEC3GQ9HC16 384 aaKnown RBP16.78■□□□□ 0.28
TUBB3-213ENST00000557262 SCML2Q9UQR0 700 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 MYOFQ9NZM1 2061 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 TULP3O75386 442 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 ZNF202O95125 648 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 TBX18O95935 607 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 TRIM49P0CI25 452 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 TRIM49CP0CI26 452 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 ACO1P21399 889 aaKnown RBP16.77■□□□□ 0.28
TUBB3-213ENST00000557262 RNF43Q68DV7 783 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 TCEAL6Q6IPX3 200 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 WHAMMQ8TF30 809 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 TCEAL3Q969E4 200 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 LSM14BQ9BX40 385 aaKnown RBP16.77■□□□□ 0.28
TUBB3-213ENST00000557262 NIF3L1Q9GZT8 377 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 PNPLA8Q9NP80 782 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 CYLDQ9NQC7 956 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 PCDHA5Q9Y5H7 936 aa16.77■□□□□ 0.28
TUBB3-213ENST00000557262 CNOT1A5YKK6 2376 aaKnown RBP16.76■□□□□ 0.27
TUBB3-213ENST00000557262 GREM1O60565 184 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 ADAM23O75077 832 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 CILPO75339 1184 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 BCKDHBP21953 392 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 KCNA4P22459 653 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 GTF2H1P32780 548 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 P2RY2P41231 377 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 PLA2G4AP47712 749 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 GOLGA8FQ08AF8 430 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 GOLGA8DPQ0D2H9 430 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 BYSLQ13895 437 aaKnown RBP16.76■□□□□ 0.27
TUBB3-213ENST00000557262 KLHDC10Q6PID8 442 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 GPRIN1Q7Z2K8 1008 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 TRMT11Q7Z4G4 463 aaKnown RBP16.76■□□□□ 0.27
TUBB3-213ENST00000557262 JAKMIP2Q96AA8 810 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 MMRN2Q9H8L6 949 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 TMEM8AQ9HCN3 771 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 ZDHHC4Q9NPG8 344 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 OSER1Q9NX31 292 aa16.76■□□□□ 0.27
TUBB3-213ENST00000557262 LSM7Q9UK45 103 aaKnown RBP16.76■□□□□ 0.27
TUBB3-213ENST00000557262 ABCA7Q8IZY2 2146 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 KHNYNO15037 678 aaKnown RBP16.75■□□□□ 0.27
TUBB3-213ENST00000557262 CYP26A1O43174 497 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 MAP3K13O43283 966 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 RARGP13631 454 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 CD58P19256 250 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 DHPSP49366 369 aaPredicted RBP16.75■□□□□ 0.27
TUBB3-213ENST00000557262 KIF11P52732 1056 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 EDRF1Q3B7T1 1238 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 ZCWPW2Q504Y3 356 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 N4BP2L1Q5TBK1 243 aaPredicted RBP16.75■□□□□ 0.27
TUBB3-213ENST00000557262 KRT39Q6A163 491 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 PGBD3Q8N328 593 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 ZNF276Q8N554 614 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 ZNF513Q8N8E2 541 aaPredicted RBP16.75■□□□□ 0.27
TUBB3-213ENST00000557262 TERB1Q8NA31 727 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 RLN3Q8WXF3 142 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 CCDC34Q96HJ3 373 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 FAXDC2Q96IV6 333 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 HEXIM2Q96MH2 286 aaKnown RBP16.75■□□□□ 0.27
TUBB3-213ENST00000557262 XPO6Q96QU8 1125 aaKnown RBP16.75■□□□□ 0.27
TUBB3-213ENST00000557262 EDEM2Q9BV94 578 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 DUSP16Q9BY84 665 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 GOLPH3LQ9H4A5 285 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 NMUR1Q9HB89 426 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.75■□□□□ 0.27
TUBB3-213ENST00000557262 BCCIPQ9P287 314 aaKnown RBP eCLIP16.75■□□□□ 0.27
TUBB3-213ENST00000557262 WDR35Q9P2L0 1181 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 DNMT3LQ9UJW3 386 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 STARD13Q9Y3M8 1113 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 ACACBO00763 2458 aa16.75■□□□□ 0.27
TUBB3-213ENST00000557262 A0A1W2PQH9 124 aa16.74■□□□□ 0.27
TUBB3-213ENST00000557262 PSEN1P49768 467 aa16.74■□□□□ 0.27
TUBB3-213ENST00000557262 C10orf76Q5T2E6 689 aa16.74■□□□□ 0.27
TUBB3-213ENST00000557262 PPP1R26Q5T8A7 1209 aaPredicted RBP16.74■□□□□ 0.27
TUBB3-213ENST00000557262 GRAMD4Q6IC98 578 aa16.74■□□□□ 0.27
TUBB3-213ENST00000557262 LPCAT2Q7L5N7 544 aa16.74■□□□□ 0.27
TUBB3-213ENST00000557262 CYP2U1Q7Z449 544 aa16.74■□□□□ 0.27
TUBB3-213ENST00000557262 TTC39CQ8N584 583 aa16.74■□□□□ 0.27
TUBB3-213ENST00000557262 HMGB4Q8WW32 186 aa16.74■□□□□ 0.27
TUBB3-213ENST00000557262 SPACA7Q96KW9 195 aa16.74■□□□□ 0.27
TUBB3-213ENST00000557262 BBS2Q9BXC9 721 aa16.74■□□□□ 0.27
TUBB3-213ENST00000557262 NUDT5Q9UKK9 219 aa16.74■□□□□ 0.27
TUBB3-213ENST00000557262 CIZ1Q9ULV3 898 aaPredicted RBP16.74■□□□□ 0.27
TUBB3-213ENST00000557262 MYH10P35580 1976 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 TCRBV21S2A2A0A5A6 115 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 C4orf47A7E2U8 309 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 NEDD8-MDP1E9PL57 170 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 TRIM24O15164 1050 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 CETN3O15182 167 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 CACNG3O60359 315 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 STX10O60499 249 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 KCNK5O95279 499 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 RALAP11233 206 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 TYRP14679 529 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 NTSR1P30989 418 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 MAP7D1Q3KQU3 841 aa16.73■□□□□ 0.27
TUBB3-213ENST00000557262 ZNF394Q53GI3 561 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms