RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 ITIH5Q86UX2 942 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 FAM35AQ86V20 835 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 CCDC105Q8IYK2 499 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 DCP1BQ8IZD4 617 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 TMEM86AQ8N2M4 240 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 CSGALNACT2Q8N6G5 542 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 DTWD2Q8NBA8 298 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 ATAD1Q8NBU5 361 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 OR10T2Q8NGX3 314 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 SPATA18Q8TC71 538 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 SPPL2BQ8TCT7 592 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 SMARCD2Q92925 531 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 PSMG2Q969U7 264 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 E2F7Q96AV8 911 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 TCEAL4Q96EI5 215 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 NELL2Q99435 816 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 KXD1Q9BQD3 176 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 DDX23Q9BUQ8 820 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 OSBPL6Q9BZF3 934 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 TBC1D17Q9HA65 648 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 TRPV4Q9HBA0 871 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 ARHGEF4Q9NR80 690 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 INTS7Q9NVH2 962 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 GDAP2Q9NXN4 497 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 CGNQ9P2M7 1197 aaKnown RBP10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 TRIM33Q9UPN9 1127 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 AGAP1Q9UPQ3 857 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 SCN1AP35498 2009 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 UBE4BO95155 1302 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 MUC6Q6W4X9 2439 aa10.53□□□□□ -0.72
HNRNPC-228ENST00000557033 PROB1E7EW31 1015 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 AGRPO00253 132 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 HUS1O60921 280 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 AVPP01185 164 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 SLFN14P0C7P3 912 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 CMA1P23946 247 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 POLR2BP30876 1174 aaKnown RBP10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 HOXD13P35453 343 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 GNALP38405 381 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 SNW1Q13573 536 aaKnown RBP10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 MLF2Q15773 248 aaPredicted RBP10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 DUOXA2Q1HG44 320 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 SLC39A12Q504Y0 691 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 WSCD1Q658N2 575 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 STRA8Q7Z7C7 330 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 LRRTM3Q86VH5 581 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 CEP57L1Q8IYX8 460 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 CXorf38Q8TB03 319 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 SCFD1Q8WVM8 642 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 DNASE1L2Q92874 299 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 HPS3Q969F9 1004 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 ANKRD36BP1Q96IX9 119 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 TMEM209Q96SK2 561 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 CDC6Q99741 560 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 ACBD6Q9BR61 282 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 PLA2G2FQ9BZM2 168 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 PDE11AQ9HCR9 933 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 TRPV5Q9NQA5 729 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 INTS13Q9NVM9 706 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 HSPBP1Q9NZL4 362 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 USP25Q9UHP3 1055 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 TCHHQ07283 1943 aa10.52□□□□□ -0.73
HNRNPC-228ENST00000557033 KANSL1LA0AUZ9 987 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 TGFB1I1O43294 461 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 RASGRP1O95267 797 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 TNNC2P02585 160 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 MYL1P05976 194 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 KRT19P08727 400 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 TMEM191BP0C7N4 346 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 HAPLN1P10915 354 aaPredicted RBP10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 PSMC3P17980 439 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 FCARP24071 287 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 NBL1P41271 181 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 LHX1P48742 406 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 ZNF143P52747 638 aaPredicted RBP10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 MYL7Q01449 175 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 TSPY1Q01534 308 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 PTSQ03393 145 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 MYO1EQ12965 1108 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 VEPH1Q14D04 833 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 TEAD2Q15562 447 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 BMT2Q1RMZ1 405 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 MGAT5BQ3V5L5 792 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 SYT9Q86SS6 491 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 TMC8Q8IU68 726 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 WDR49Q8IV35 697 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 SCUBE1Q8IWY4 988 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 C12orf56Q8IXR9 622 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 TOP6BLQ8N6T0 577 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 PJA1Q8NG27 643 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 SHKBP1Q8TBC3 707 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 ZSCAN18Q8TBC5 510 aaPredicted RBP10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 NOC3LQ8WTT2 800 aaKnown RBP10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 DEPDC1BQ8WUY9 529 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 DDX1Q92499 740 aaKnown RBP10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 IRF7Q92985 503 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 ZSWIM3Q96MP5 696 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 TRMT61BQ9BVS5 477 aaKnown RBP10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 SMG9Q9H0W8 520 aaKnown RBP10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 BLZF1Q9H2G9 400 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms