RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 DDR2Q16832 855 aa24.82■■□□□ 1.56
SIX4-203ENST00000556952 HADHQ16836 314 aaKnown RBP24.82■■□□□ 1.56
SIX4-203ENST00000556952 TCEAL5Q5H9L2 206 aa24.82■■□□□ 1.56
SIX4-203ENST00000556952 POLNQ7Z5Q5 900 aa24.82■■□□□ 1.56
SIX4-203ENST00000556952 CREG2Q8IUH2 290 aa24.82■■□□□ 1.56
SIX4-203ENST00000556952 ALG3Q92685 438 aa24.82■■□□□ 1.56
SIX4-203ENST00000556952 NSUN3Q9H649 340 aaKnown RBP24.82■■□□□ 1.56
SIX4-203ENST00000556952 SLC27A5Q9Y2P5 690 aa24.82■■□□□ 1.56
SIX4-203ENST00000556952 YJEFN3A6XGL0 299 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 E7ENQ6 273 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 RTN3O95197 1032 aaPredicted RBP24.81■■□□□ 1.56
SIX4-203ENST00000556952 SSR1P43307 286 aaKnown RBP24.81■■□□□ 1.56
SIX4-203ENST00000556952 MARCKSL1P49006 195 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 TAS2R40P59535 323 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 CCDC181Q5TID7 509 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 DAB2IPQ5VWQ8 1189 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 BEND5Q7L4P6 421 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 TMC7Q7Z402 723 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 SCAMP5Q8TAC9 235 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 MICAL1Q8TDZ2 1067 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 NDRG1Q92597 394 aaKnown RBP24.81■■□□□ 1.56
SIX4-203ENST00000556952 CAPZA3Q96KX2 299 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 STAP1Q9ULZ2 295 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 IRAK3Q9Y616 596 aa24.81■■□□□ 1.56
SIX4-203ENST00000556952 HIDE1A8MVS5 230 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 SLU7O95391 586 aaKnown RBP24.8■■□□□ 1.56
SIX4-203ENST00000556952 GPR15P49685 360 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 DCAF12L1Q5VU92 463 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 DENND5BQ6ZUT9 1274 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 KATNAL2Q8IYT4 538 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 DEFB106AQ8N104 65 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 RRN3Q9NYV6 651 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 IL37Q9NZH6 218 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 SCML2Q9UQR0 700 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 KRT7P08729 469 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 PAFAH1B1P43034 410 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 SLC25A11Q02978 314 aaKnown RBP24.8■■□□□ 1.56
SIX4-203ENST00000556952 CLUL1Q15846 466 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 C15orf59Q2T9L4 293 aaPredicted RBP24.8■■□□□ 1.56
SIX4-203ENST00000556952 SLC25A52Q3SY17 297 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 STRADAQ7RTN6 431 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 RASGEF1CQ8N431 466 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 ARFGAP1Q8N6T3 406 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 MNS1Q8NEH6 495 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 ACTRT1Q8TDG2 376 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 FAM172AQ8WUF8 416 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 CENPIQ92674 756 aaPredicted RBP24.8■■□□□ 1.56
SIX4-203ENST00000556952 CARD6Q9BX69 1037 aa24.8■■□□□ 1.56
SIX4-203ENST00000556952 TTC7AQ9ULT0 858 aaPredicted RBP24.8■■□□□ 1.56
SIX4-203ENST00000556952 FAM92AA1XBS5 289 aa24.79■■□□□ 1.56
SIX4-203ENST00000556952 CAPN9O14815 690 aa24.79■■□□□ 1.56
SIX4-203ENST00000556952 TEX28O15482 410 aa24.79■■□□□ 1.56
SIX4-203ENST00000556952 CEP104O60308 925 aa24.79■■□□□ 1.56
SIX4-203ENST00000556952 GTF2F1P35269 517 aaKnown RBP eCLIP24.79■■□□□ 1.56
SIX4-203ENST00000556952 CDO1Q16878 200 aa24.79■■□□□ 1.56
SIX4-203ENST00000556952 DCAF6Q58WW2 860 aa24.79■■□□□ 1.56
SIX4-203ENST00000556952 SDHAF4Q5VUM1 108 aa24.79■■□□□ 1.56
SIX4-203ENST00000556952 HFE2Q6ZVN8 426 aa24.79■■□□□ 1.56
SIX4-203ENST00000556952 ZNF572Q7Z3I7 529 aaPredicted RBP24.79■■□□□ 1.56
SIX4-203ENST00000556952 ARHGAP18Q8N392 663 aa24.79■■□□□ 1.56
SIX4-203ENST00000556952 NT5C3BQ969T7 300 aa24.79■■□□□ 1.56
SIX4-203ENST00000556952 NGRNQ9NPE2 291 aaKnown RBP24.79■■□□□ 1.56
SIX4-203ENST00000556952 DDX56Q9NY93 547 aaKnown RBP24.79■■□□□ 1.56
SIX4-203ENST00000556952 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.78■■□□□ 1.56
SIX4-203ENST00000556952 SOAT2O75908 522 aa24.78■■□□□ 1.56
SIX4-203ENST00000556952 CXCL14O95715 111 aa24.78■■□□□ 1.56
SIX4-203ENST00000556952 MIPP30301 263 aa24.78■■□□□ 1.56
SIX4-203ENST00000556952 CA8P35219 290 aa24.78■■□□□ 1.56
SIX4-203ENST00000556952 ATP11AP98196 1134 aa24.78■■□□□ 1.56
SIX4-203ENST00000556952 IFRD2Q12894 506 aaPredicted RBP24.78■■□□□ 1.56
SIX4-203ENST00000556952 SMC1AQ14683 1233 aaKnown RBP24.78■■□□□ 1.56
SIX4-203ENST00000556952 SEL1L2Q5TEA6 688 aa24.78■■□□□ 1.56
SIX4-203ENST00000556952 RBM23Q86U06 439 aaKnown RBP24.78■■□□□ 1.56
SIX4-203ENST00000556952 RPGRIP1Q96KN7 1286 aa24.78■■□□□ 1.56
SIX4-203ENST00000556952 EHD2Q9NZN4 543 aa24.78■■□□□ 1.56
SIX4-203ENST00000556952 USP18Q9UMW8 372 aa24.78■■□□□ 1.56
SIX4-203ENST00000556952 C2orf71A6NGG8 1288 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 PGRMC1O00264 195 aaKnown RBP24.77■■□□□ 1.56
SIX4-203ENST00000556952 FYNP06241 537 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 ADH1AP07327 375 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 CNPP09543 421 aaKnown RBP24.77■■□□□ 1.56
SIX4-203ENST00000556952 TCF4P15884 667 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 ATF6P18850 670 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 SULT1E1P49888 294 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 YWHAGP61981 247 aaKnown RBP eCLIP24.77■■□□□ 1.56
SIX4-203ENST00000556952 HYAL1Q12794 435 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 BSPRYQ5W0U4 402 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 PDE12Q6L8Q7 609 aaKnown RBP24.77■■□□□ 1.56
SIX4-203ENST00000556952 BNIPLQ7Z465 357 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 EXD1Q8NHP7 514 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 NAP1L3Q99457 506 aaPredicted RBP24.77■■□□□ 1.56
SIX4-203ENST00000556952 NPY6RQ99463 290 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 EMILIN2Q9BXX0 1053 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 CYP4F11Q9HBI6 524 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 ABCC13Q9NSE7 274 aa24.77■■□□□ 1.56
SIX4-203ENST00000556952 PER2O15055 1255 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 PRPSAP2O60256 369 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 SEC24AO95486 1093 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 NCAM1P13591 858 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 YWHAQP27348 245 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms