RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 MMS19Q96T76 1030 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ZSWIM1Q9BR11 485 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 C11orf84Q9BUA3 381 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 NUP58Q9BVL2 599 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 STK33Q9BYT3 514 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 CEP41Q9BYV8 373 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ELOVL4Q9GZR5 314 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ADAM19Q9H013 955 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 DPEP3Q9H4B8 488 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 NPHS2Q9NP85 383 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 LATS2Q9NRM7 1088 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 CISHQ9NSE2 258 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 SLC38A7Q9NVC3 462 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 ARHGAP20Q9P2F6 1191 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 IMPACTQ9P2X3 320 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 CD207Q9UJ71 328 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 PYCARDQ9ULZ3 195 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 L1RE1Q9UN81 338 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 TFR2Q9UP52 801 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 LUC7L2Q9Y383 392 aaKnown RBP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 RWDD3Q9Y3V2 267 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 RNF114Q9Y508 228 aa5.65□□□□□ -1.5
ATXN3-244ENST00000556898 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.65□□□□□ -1.5
ATXN3-244ENST00000556898 PTPRSQ13332 1948 aa5.65□□□□□ -1.51
ATXN3-244ENST00000556898 A0A1W2PP55 124 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 KPNA7A9QM74 516 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 LOC730098B7Z3J9 87 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 CYB561D2O14569 222 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 XPOTO43592 962 aaKnown RBP5.64□□□□□ -1.51
ATXN3-244ENST00000556898 ATP2C2O75185 946 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 B3GAT3O94766 335 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 CSPG5O95196 566 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 GALTP07902 379 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 PDGFRBP09619 1106 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 LINC00271P0C7V0 271 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 CHRNB2P17787 502 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 ATICP31939 592 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 SOX5P35711 763 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 STAT1P42224 750 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 NDST1P52848 882 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 MFAP3P55082 362 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 TNNC1P63316 161 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 SIGLEC14Q08ET2 396 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 BTG3Q14201 252 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-244ENST00000556898 SV2CQ496J9 727 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 SPOUT1Q5T280 376 aaKnown RBP5.64□□□□□ -1.51
ATXN3-244ENST00000556898 SFMBT2Q5VUG0 894 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 WSCD1Q658N2 575 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 HGSNATQ68CP4 663 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 DCLRE1AQ6PJP8 1040 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 TMEM270Q6UE05 265 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 DPH6Q7L8W6 267 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 ZNF571Q7Z3V5 609 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-244ENST00000556898 IRF2BP2Q7Z5L9 587 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 NOP9Q86U38 636 aaKnown RBP5.64□□□□□ -1.51
ATXN3-244ENST00000556898 SLC47A2Q86VL8 602 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 PALB2Q86YC2 1186 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 FAM20CQ8IXL6 584 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 PDCL2Q8N4E4 241 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 FIBCD1Q8N539 461 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 LRRC52Q8N7C0 313 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 RBBP8NLQ8NC74 664 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-244ENST00000556898 CCDC150Q8NCX0 1101 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 OR8K1Q8NGG5 319 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 OR6B3Q8NGW1 331 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 LNX1Q8TBB1 728 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-244ENST00000556898 RSPH1Q8WYR4 309 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 TFAP2BQ92481 460 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 SHC3Q92529 594 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 TAF4BQ92750 862 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 PPP2R3CQ969Q6 453 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 HHIPQ96QV1 700 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 TMEM209Q96SK2 561 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 PCDHB18PQ96TA0 734 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 DNAJC7Q99615 494 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 FAM83CQ9BQN1 747 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 RTP3Q9BQQ7 232 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 DESI2Q9BSY9 194 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 VN1R3Q9BXE9 311 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 BCO2Q9BYV7 579 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 GPR62Q9BZJ7 368 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 HAUS4Q9H6D7 363 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 ALG13Q9NP73 1137 aaKnown RBP5.64□□□□□ -1.51
ATXN3-244ENST00000556898 FAM86C1Q9NVL1 165 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 FBXL5Q9UKA1 691 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 FAN1Q9Y2M0 1017 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 R3HCC1Q9Y3T6 440 aaKnown RBP5.64□□□□□ -1.51
ATXN3-244ENST00000556898 PDCD11Q14690 1871 aaKnown RBP5.64□□□□□ -1.51
ATXN3-244ENST00000556898 MICAL3Q7RTP6 2002 aa5.64□□□□□ -1.51
ATXN3-244ENST00000556898 GOLGA6L6A8MZA4 724 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 H0Y858 1186 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 PDE2AO00408 941 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 DDX3XO00571 662 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 ZNF263O14978 683 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 GRM6O15303 877 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 CILPO75339 1184 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 TADA2AO75478 443 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 ALDH2P05091 517 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 MMEP08473 750 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 TPM1P09493 284 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms