RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 DCLK1O15075 740 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 MYF5P13349 255 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 BRAFP15056 766 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 SLC11A2P49281 568 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 ANXA11P50995 505 aaKnown RBP6.14□□□□□ -1.43
HIF1A-209ENST00000556827 PRELPP51888 382 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 CACNA2D1P54289 1103 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 TBX4P57082 545 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 FAM193AP78312 1265 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 TCF15Q12870 199 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 CTBP1Q13363 440 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 SEMA5AQ13591 1074 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 SF3B3Q15393 1217 aaKnown RBP6.14□□□□□ -1.43
HIF1A-209ENST00000556827 MTHFSDQ2M296 383 aaKnown RBP6.14□□□□□ -1.43
HIF1A-209ENST00000556827 PREPLQ4J6C6 727 aaPredicted RBP6.14□□□□□ -1.43
HIF1A-209ENST00000556827 COBLL1Q53SF7 1204 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 ZNF362Q5T0B9 420 aaPredicted RBP6.14□□□□□ -1.43
HIF1A-209ENST00000556827 SP5Q6BEB4 398 aaPredicted RBP6.14□□□□□ -1.43
HIF1A-209ENST00000556827 ZNF790Q6PG37 636 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 TMPRSS9Q7Z410 1059 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 CNBD1Q8NA66 436 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 MAML1Q92585 1016 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 CFAP53Q96M91 514 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 SLC46A1Q96NT5 459 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 TAOK3Q9H2K8 898 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 SMURF2Q9HAU4 748 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 DDX21Q9NR30 783 aaKnown RBP eCLIP6.14□□□□□ -1.43
HIF1A-209ENST00000556827 SACM1LQ9NTJ5 587 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 HESX1Q9UBX0 185 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 PLEKHM1Q9Y4G2 1056 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 CARMIL3Q8ND23 1372 aa6.14□□□□□ -1.43
HIF1A-209ENST00000556827 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 APAF1O14727 1248 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 YY2O15391 372 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 PRC1O43663 620 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 ORC4O43929 436 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 MAP4K4O95819 1239 aaPredicted RBP6.13□□□□□ -1.43
HIF1A-209ENST00000556827 IGLV2-14P01704 120 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 HSPA1AP0DMV8 641 aaKnown RBP6.13□□□□□ -1.43
HIF1A-209ENST00000556827 HSPA1BP0DMV9 641 aaKnown RBP6.13□□□□□ -1.43
HIF1A-209ENST00000556827 EN2P19622 333 aaPredicted RBP6.13□□□□□ -1.43
HIF1A-209ENST00000556827 IL6STP40189 918 aaPredicted RBP6.13□□□□□ -1.43
HIF1A-209ENST00000556827 ZNF134P52741 427 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 EIF5P55010 431 aaKnown RBP6.13□□□□□ -1.43
HIF1A-209ENST00000556827 RPS7P62081 194 aaKnown RBP6.13□□□□□ -1.43
HIF1A-209ENST00000556827 C3orf38Q5JPI3 329 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 CC2D1BQ5T0F9 858 aaKnown RBP6.13□□□□□ -1.43
HIF1A-209ENST00000556827 AKNAD1Q5T1N1 836 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 ZNF783Q6ZMS7 281 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 NBPF5PQ86XG9 351 aaPredicted RBP6.13□□□□□ -1.43
HIF1A-209ENST00000556827 SLC15A4Q8N697 577 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 OR6B3Q8NGW1 331 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 SLC30A5Q8TAD4 765 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 KBTBD7Q8WVZ9 684 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 MASTLQ96GX5 879 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 CCDC136Q96JN2 1154 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 PDLIM2Q96JY6 352 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 SARGQ9BW04 601 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 SIK2Q9H0K1 926 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 GEMIN8Q9NWZ8 242 aaKnown RBP6.13□□□□□ -1.43
HIF1A-209ENST00000556827 SLC17A6Q9P2U8 582 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 XPR1Q9UBH6 696 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 NUDCQ9Y266 331 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 TMX2Q9Y320 296 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 RAD54BQ9Y620 910 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 ITGB4P16144 1822 aa6.13□□□□□ -1.43
HIF1A-209ENST00000556827 UTRNP46939 3433 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 F5H697 171 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 TBC1D4O60343 1298 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 PQBP1O60828 265 aaKnown RBP6.12□□□□□ -1.43
HIF1A-209ENST00000556827 MAP2P11137 1827 aaKnown RBP6.12□□□□□ -1.43
HIF1A-209ENST00000556827 NPTX2P47972 431 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 FMO1Q01740 532 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 SLC13A2Q13183 592 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 POLD3Q15054 466 aaPredicted RBP6.12□□□□□ -1.43
HIF1A-209ENST00000556827 CNGA2Q16280 664 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 ZNF831Q5JPB2 1677 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 TBC1D9BQ66K14 1250 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 TSHZ1Q6ZSZ6 1077 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 MPP5Q8N3R9 675 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 ZNF384Q8TF68 577 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 SNX19Q92543 992 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 TTC17Q96AE7 1141 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 APIPQ96GX9 242 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 FBXL20Q96IG2 436 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 TMX4Q9H1E5 349 aaPredicted RBP6.12□□□□□ -1.43
HIF1A-209ENST00000556827 KLK15Q9H2R5 256 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 SEMA4GQ9NTN9 838 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 INTS13Q9NVM9 706 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 TBC1D30Q9Y2I9 924 aa6.12□□□□□ -1.43
HIF1A-209ENST00000556827 ANKRD26Q9UPS8 1709 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 HEG1Q9ULI3 1381 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 FRS3O43559 492 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 MGEA5O60502 916 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 DDNO94850 711 aaPredicted RBP6.11□□□□□ -1.43
HIF1A-209ENST00000556827 ZKSCAN1P17029 563 aaPredicted RBP6.11□□□□□ -1.43
HIF1A-209ENST00000556827 ALDH1B1P30837 517 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 FOLR3P41439 243 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 GCLCP48506 637 aaPredicted RBP6.11□□□□□ -1.43
HIF1A-209ENST00000556827 LILRA4P59901 499 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms