RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	TRIM67	Q6ZTA4	783 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	PHLDB2	Q86SQ0	1253 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	CPLX3	Q8WVH0	158 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	KCTD13	Q8WZ19	329 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	BAP1	Q92560	729 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	EDEM1	Q92611	657 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	ASIC4	Q96FT7	647 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	PIWIL1	Q96J94	861 aa	Known RBP	9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	CEP295NL	Q96MC4	621 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	SLITRK1	Q96PX8	696 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	PCDHB18P	Q96TA0	734 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	XPO4	Q9C0E2	1151 aa	Known RBP	9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	LRRC4	Q9HBW1	653 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	TDP1	Q9NUW8	608 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	UXT	Q9UBK9	157 aa	Predicted RBP	9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	NAGPA	Q9UK23	515 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	CA14	Q9ULX7	337 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	PCDHGC3	Q9UN70	934 aa		9.27	□□□□□ -0.93
PRKCH-222	ENST00000556778	TRAV19	A0A0A6YYK7	116 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	KRBA1	A5PL33	1030 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	LEFTY2	O00292	366 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	ARNTL	O00327	626 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	PAPSS1	O43252	624 aa	Predicted RBP	9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	CAVIN2	O95810	425 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	OLFM2	O95897	454 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	ZBED1	O96006	694 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	FYN	P06241	537 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	CKM	P06732	381 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	SETSIP	P0DME0	302 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	MBL2	P11226	248 aa	Predicted RBP	9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	ARSA	P15289	507 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	PSMC3	P17980	439 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	SOX9	P48436	509 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	YWHAG	P61981	247 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	FILIP1L	Q4L180	1135 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	HECTD3	Q5T447	861 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	SNX30	Q5VWJ9	437 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	NAIF1	Q69YI7	327 aa	Predicted RBP	9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	PM20D1	Q6GTS8	502 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	MTSS1L	Q765P7	747 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	CCDC186	Q7Z3E2	898 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	DNAAF5	Q86Y56	855 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	MFSD6L	Q8IWD5	586 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	CELF5	Q8N6W0	485 aa	Known RBP	9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	C1orf131	Q8NDD1	294 aa	Known RBP	9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	OLIG1	Q8TAK6	271 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	EPS8L1	Q8TE68	723 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	SH3RF2	Q8TEC5	729 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	CPA5	Q8WXQ8	436 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	FAM81B	Q96LP2	452 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	CPXM1	Q96SM3	734 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	TRMT61B	Q9BVS5	477 aa	Known RBP	9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	DNAI2	Q9GZS0	605 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	FBXO44	Q9H4M3	255 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	PNPLA8	Q9NP80	782 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	ST7	Q9NRC1	585 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	HEBP1	Q9NRV9	189 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	COMMD8	Q9NX08	183 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	GTSE1	Q9NYZ3	720 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	NOCT	Q9UK39	431 aa	Known RBP	9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	DUSP12	Q9UNI6	340 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	CPQ	Q9Y646	472 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	WNT6	Q9Y6F9	365 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	BDP1	A6H8Y1	2624 aa		9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778	TCF20	Q9UGU0	1960 aa	Known RBP	9.26	□□□□□ -0.93
PRKCH-222	ENST00000556778		A0A1W2PQC6	194 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	LRRC53	A6NM62	1247 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778		E5RJQ4	531 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	MED7	O43513	233 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	GREM1	O60565	184 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	TLR5	O60602	858 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	ERBB2	P04626	1255 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	HMBS	P08397	361 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	IRF1	P10914	325 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	SRF	P11831	508 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	SKIL	P12757	684 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	ALAD	P13716	330 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	NDUFV2	P19404	249 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	WEE1	P30291	646 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	KRT9	P35527	623 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	STAT1	P42224	750 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	PPP3CC	P48454	512 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	RPL34	P49207	117 aa	Known RBP	9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	SLC8A3	P57103	927 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	DAOA	P59103	153 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	TPM4	P67936	248 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	SLC7A9	P82251	487 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	GOLGA8F	Q08AF8	430 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	GOLGA8DP	Q0D2H9	430 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	FCHO2	Q0JRZ9	810 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	EFEMP1	Q12805	493 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	PDCL	Q13371	301 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	SLC44A4	Q53GD3	710 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	BSPRY	Q5W0U4	402 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	IRF2BP2	Q7Z5L9	587 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	TMEM110	Q86TL2	294 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	MIB1	Q86YT6	1006 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	SIX5	Q8N196	739 aa		9.25	□□□□□ -0.93
PRKCH-222	ENST00000556778	SIX6OS1	Q8N1H7	587 aa		9.25	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms