RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 WNT6Q9Y6F9 365 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 SCN1AP35498 2009 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 ZNF292O60281 2723 aa7.74□□□□□ -1.17
SCFD1-222ENST00000556768 E2F8A0AVK6 867 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 SHISA7A6NL88 538 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 GNA14O95837 355 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 OAS1P00973 400 aaKnown RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 ACO1P21399 889 aaKnown RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 ATP5C1P36542 298 aaKnown RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 CACNA2D1P54289 1103 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 SATB1Q01826 763 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 ORC1Q13415 861 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 CCDC40Q4G0X9 1142 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 ZNF394Q53GI3 561 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 C1orf220Q5T0J3 134 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 KLHL10Q6JEL2 608 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 CAPN12Q6ZSI9 719 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 LONP2Q86WA8 852 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 RGL4Q8IZJ4 473 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 ADGRG2Q8IZP9 1017 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 ELMO3Q96BJ8 720 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 OTUB2Q96DC9 234 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 TMEM176AQ96HP8 235 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 CEP63Q96MT8 703 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 CDK5RAP1Q96SZ6 601 aaKnown RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 SPSB2Q99619 263 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 RNF38Q9H0F5 515 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 SDCBP2Q9H190 292 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 LINC00597Q9H2U6 94 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 CSNK1G1Q9HCP0 422 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 PNPLA8Q9NP80 782 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 PRDM9Q9NQV7 894 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 CFAP97Q9P2B7 532 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 LSM7Q9UK45 103 aaKnown RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 NME7Q9Y5B8 376 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 DOCK6Q96HP0 2047 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 DMXL1Q9Y485 3027 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 OTOL1A6NHN0 477 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 TNFRSF10BO14763 440 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 TLR5O60602 858 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 CILPO75339 1184 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 PAPSS2O95340 614 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 RALAP11233 206 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 SDHBP21912 280 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 TBXAS1P24557 533 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 HOXA6P31267 233 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 USP4Q13107 963 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 SIM2Q14190 667 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 SNX30Q5VWJ9 437 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 HEATR6Q6AI08 1181 aaKnown RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 ISM2Q6H9L7 571 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 PRR23BQ6ZRT6 265 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 Q6ZS52 159 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 PAQR9Q6ZVX9 377 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 CEP68Q76N32 757 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 FILIP1Q7Z7B0 1213 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 CAMKK1Q8N5S9 505 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 NELL1Q92832 810 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 ERCC4Q92889 916 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 JAKMIP2Q96AA8 810 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 ACDQ96AP0 544 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 DUSP16Q9BY84 665 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 EPC1Q9H2F5 836 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 CISHQ9NSE2 258 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 IL37Q9NZH6 218 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 HESX1Q9UBX0 185 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 KIAA1257Q9ULG3 409 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 SMG5Q9UPR3 1016 aaKnown RBP7.73□□□□□ -1.17
SCFD1-222ENST00000556768 SCML2Q9UQR0 700 aa7.73□□□□□ -1.17
SCFD1-222ENST00000556768 FAM186AA6NE01 2351 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 GVINP1Q7Z2Y8 2422 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 CCDC163A0A0D9SF12 145 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 FAM92AA1XBS5 289 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 ZBTB24O43167 697 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-222ENST00000556768 COCHO43405 550 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 LILRB5O75023 590 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 OLFM2O95897 454 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 ANP32AP39687 249 aaKnown RBP7.72□□□□□ -1.17
SCFD1-222ENST00000556768 UBE2HP62256 183 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 GAS6Q14393 721 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 CLEC20AQ6ZU45 233 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 KIAA2013Q8IYS2 634 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 ARHGAP18Q8N392 663 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 SUMF1Q8NBK3 374 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 CHFRQ96EP1 664 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 NOTCH4Q99466 2003 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 SMOQ99835 787 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 APOBEC3GQ9HC16 384 aaKnown RBP7.72□□□□□ -1.17
SCFD1-222ENST00000556768 TMEM30AQ9NV96 361 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 CHMP5Q9NZZ3 219 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 GMIPQ9P107 970 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 HMGXB4Q9UGU5 601 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 DNMT3LQ9UJW3 386 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 NAGPAQ9UK23 515 aa7.72□□□□□ -1.17
SCFD1-222ENST00000556768 CHURC1-FNTBB4DL54 471 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 FOXD2O60548 495 aaPredicted RBP7.71□□□□□ -1.17
SCFD1-222ENST00000556768 EGFP01133 1207 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 APODP05090 189 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 CCDC192P0DO97 292 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms