RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 TESMINQ9Y4I5 508 aa4.88□□□□□ -1.63
TRAV15-201ENST00000556680 ROBO1Q9Y6N7 1651 aa4.88□□□□□ -1.63
TRAV15-201ENST00000556680 RGPD1P0DJD0 1748 aa4.88□□□□□ -1.63
TRAV15-201ENST00000556680 MSH6P52701 1360 aa4.88□□□□□ -1.63
TRAV15-201ENST00000556680 BLMP54132 1417 aaPredicted RBP4.88□□□□□ -1.63
TRAV15-201ENST00000556680 PIP5K1BO14986 540 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 FYB1O15117 783 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 SRGAP2O75044 1071 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 CDKL5O76039 1030 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 GATA3P23771 443 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 GABRB3P28472 473 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 MTHFSP49914 203 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 VAV2P52735 878 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 SPARCL1Q14515 664 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 PTCHD3Q3KNS1 767 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 ZIK1Q3SY52 487 aaPredicted RBP4.87□□□□□ -1.63
TRAV15-201ENST00000556680 TIGD2Q4W5G0 525 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 ARL6IP4Q66PJ3 421 aaKnown RBP4.87□□□□□ -1.63
TRAV15-201ENST00000556680 SP5Q6BEB4 398 aaPredicted RBP4.87□□□□□ -1.63
TRAV15-201ENST00000556680 TMPRSS9Q7Z410 1059 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 KRT73Q86Y46 540 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 DNAJB14Q8TBM8 379 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 IPO4Q8TEX9 1081 aaKnown RBP4.87□□□□□ -1.63
TRAV15-201ENST00000556680 PNISRQ8TF01 805 aaKnown RBP4.87□□□□□ -1.63
TRAV15-201ENST00000556680 DVL3Q92997 716 aaPredicted RBP4.87□□□□□ -1.63
TRAV15-201ENST00000556680 NACC2Q96BF6 587 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 GDF15Q99988 308 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 TPSD1Q9BZJ3 242 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 CXorf36Q9H7Y0 433 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 AS3MTQ9HBK9 375 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 ZBTB26Q9HCK0 441 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 TMEM74BQ9NUR3 256 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 DACT1Q9NYF0 836 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 TMOD4Q9NZQ9 345 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 DNMT3BQ9UBC3 853 aaKnown RBP4.87□□□□□ -1.63
TRAV15-201ENST00000556680 SERTAD3Q9UJW9 196 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 HPSEQ9Y251 543 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 ZBED9Q6R2W3 1325 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 TTC21BQ7Z4L5 1316 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 TTC21AQ8NDW8 1320 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 POLR3AO14802 1390 aaPredicted RBP4.87□□□□□ -1.63
TRAV15-201ENST00000556680 TMEM94Q12767 1356 aa4.87□□□□□ -1.63
TRAV15-201ENST00000556680 CDK12Q9NYV4 1490 aaPredicted RBP4.87□□□□□ -1.63
TRAV15-201ENST00000556680 WNK3Q9BYP7 1800 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 CACNA1FO60840 1977 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 LGALS16A8MUM7 142 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 KCNQ3O43525 872 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 CCNT2O60583 730 aaKnown RBP4.86□□□□□ -1.63
TRAV15-201ENST00000556680 ZFPL1O95159 310 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 PDIA3P30101 505 aaKnown RBP4.86□□□□□ -1.63
TRAV15-201ENST00000556680 PPIFP30405 207 aaKnown RBP4.86□□□□□ -1.63
TRAV15-201ENST00000556680 BMPR1AP36894 532 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 BIRC3Q13489 604 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 CCNIQ14094 377 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 MAPKAPK3Q16644 382 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 BEAN1Q3B7T3 259 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 C4orf46Q504U0 113 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 ARHGAP15Q53QZ3 475 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.86□□□□□ -1.63
TRAV15-201ENST00000556680 VPS53Q5VIR6 699 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 MZT2AQ6P582 158 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 TLDC1Q6P9B6 456 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 KIAA0408Q6ZU52 694 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 CCDC28AQ8IWP9 274 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 SYNE4Q8N205 404 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 NKAPQ8N5F7 415 aaKnown RBP4.86□□□□□ -1.63
TRAV15-201ENST00000556680 B3GALNT2Q8NCR0 500 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 IL17DQ8TAD2 202 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 SLC25A43Q8WUT9 341 aaPredicted RBP4.86□□□□□ -1.63
TRAV15-201ENST00000556680 ATRIPQ8WXE1 791 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 FAM136AQ96C01 138 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 PTCD3Q96EY7 689 aaKnown RBP4.86□□□□□ -1.63
TRAV15-201ENST00000556680 PLEKHG4BQ96PX9 1271 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 OSBPL9Q96SU4 736 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 RMDN3Q96TC7 470 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 ACTRT3Q9BYD9 372 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 AMBRA1Q9C0C7 1298 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 UNKLQ9H9P5 680 aaKnown RBP4.86□□□□□ -1.63
TRAV15-201ENST00000556680 AGO4Q9HCK5 861 aaKnown RBP4.86□□□□□ -1.63
TRAV15-201ENST00000556680 NUDCQ9Y266 331 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 ZNF335Q9H4Z2 1342 aaPredicted RBP4.86□□□□□ -1.63
TRAV15-201ENST00000556680 COL3A1P02461 1466 aaPredicted RBP4.86□□□□□ -1.63
TRAV15-201ENST00000556680 C1orf167Q5SNV9 1468 aa4.86□□□□□ -1.63
TRAV15-201ENST00000556680 A0A087WZ62 844 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 CCDC189A1A4V9 331 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 UNC119BA6NIH7 251 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 AQP12BA6NM10 295 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 NPC1O15118 1278 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 PLSCR1O15162 318 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 FOXD2O60548 495 aaPredicted RBP4.85□□□□□ -1.63
TRAV15-201ENST00000556680 SNX2O60749 519 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 SRGAP2BP0DMP2 458 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 GUCY1B3Q02153 619 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 FSTL1Q12841 308 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 PTK2BQ14289 1009 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 RRS1Q15050 365 aaKnown RBP4.85□□□□□ -1.63
TRAV15-201ENST00000556680 CERCAMQ5T4B2 595 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 DEPDC1Q5TB30 811 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 RAP1GAP2Q684P5 730 aa4.85□□□□□ -1.63
TRAV15-201ENST00000556680 MRNIPQ6NTE8 343 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms